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sw_4_scaffold_1464

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_1464_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1..1317)
DNA (1317bp) protein (439aa)
CAAX amino terminal protease family protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SRC0_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG93642.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
sw_4_scaffold_1464_2

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comp(1469..2077)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Nocardiopsis lucentensis RepID=UPI00036594CC
Uncharacterized protein {ECO:0000313|EMBL:KKK87977.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
TetR family transcriptional regulator
sw_4_scaffold_1464_trna_2
unknown

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comp(2208..2278)
DNA (71bp)
transferRNA
sw_4_scaffold_1464_trna_1
unknown

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comp(2714..2788)
DNA (75bp)
transferRNA
sw_4_scaffold_1464_3
unknown

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comp(2819..2914)
DNA (96bp) protein (32aa)

This feature has no annotations

sw_4_scaffold_1464_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2918..3082)
DNA (165bp) protein (55aa)
rpmG; 50S ribosomal protein L33
rpmG; 50S ribosomal protein L33; K02913 large subunit ribosomal protein L33 id=24656833 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L33 {ECO:0000255|HAMAP-Rule:MF_00294}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_4_scaffold_1464_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(3172..3408)
DNA (237bp) protein (79aa)
rpmB; 50S ribosomal protein L28
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 id=24656832 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S Ribosomal protein L28 {ECO:0000313|EMBL:CBH22943.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
sw_4_scaffold_1464_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(3714..4973)
DNA (1260bp) protein (420aa)
Lipoprotein releasing system transmembrane protein lolC n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4I6_SALRM
lolC; Lipoprotein releasing system transmembrane protein lolC
Lipoprotein releasing system transmembrane protein lolC {ECO:0000313|EMBL:CBH22941.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibac
sw_4_scaffold_1464_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(5042..5920)
DNA (879bp) protein (293aa)
hypothetical protein
hypothetical protein id=24656829 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH22940.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_1464_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(6062..7159)
DNA (1098bp) protein (366aa)
Ribosome-binding ATPase YchF n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4I4_SALRM
hypothetical protein
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
sw_4_scaffold_1464_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(7289..7852)
DNA (564bp) protein (188aa)
pphA; Serine/threonine protein phosphatase 1; K07313 serine/threonine protein phosphatase 1 [EC:3.1.3.16] id=24656827 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
pphA; Serine/threonine protein phosphatase 1
Serine/threonine protein phosphatase {ECO:0000313|EMBL:ABC44373.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
Displaying 11 items

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