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sw_4_scaffold_1505

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_1505_1
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..1006)
DNA (1005bp) protein (335aa)
alcohol dehydrogenase n=1 Tax=Halorubrum sp. T3 RepID=UPI00037E5FD7
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ACV12161.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (strain D
sw_4_scaffold_1505_2
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1109..1951
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LT55_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM56120.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
sw_4_scaffold_1505_3
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2060..2620
DNA (561bp) protein (187aa)
Glycosyl transferase group 1 n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTG9_HALUD
glycosyl transferase group 1
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACV12159.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis
sw_4_scaffold_1505_4
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2580..3062
DNA (483bp) protein (161aa)
Glycosyl transferase group 1 n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTG9_HALUD
glycosyl transferase group 1
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACV12159.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis
sw_4_scaffold_1505_5
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3226..3885)
DNA (660bp) protein (220aa)
Putative transcriptional regulator n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JI46_HALVA
Putative transcriptional regulator {ECO:0000313|EMBL:EMA08802.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallis
XRE family transcriptional regulator
sw_4_scaffold_1505_6
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3870..4523)
DNA (654bp) protein (218aa)
Chromosome segregation ATPase-like protein {ECO:0000313|EMBL:ELY62900.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versi
sw_4_scaffold_1505_7
unknown

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4699..4857
DNA (159bp) protein (53aa)

This feature has no annotations

sw_4_scaffold_1505_8
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(5552..6493)
DNA (942bp) protein (314aa)
Uncharacterized protein {ECO:0000313|EMBL:KDE57492.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
Putative TIM-barrel fold metal-dependent hydrolase id=2136391 bin=GWD2_Deltaproteobacteria_55_8 species=Rhizobium sp. CF080 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ligW2; 5-carboxyvanillate decarboxylase
sw_4_scaffold_1505_9
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6490..7848)
DNA (1359bp) protein (453aa)
Putative allantoinase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ER31_9FIRM
Putative allantoinase {ECO:0000313|EMBL:EEQ60475.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
dihydroorotase
sw_4_scaffold_1505_10

Not on your lists

8011..8970
DNA (960bp) protein (320aa)
L-asparaginase/archaeal glu-tRNAgln amidotransferase subunit D n=1 Tax=uncultured archaeon A07HB70 RepID=V4XBI9_9ARCH
L-asparaginase/archaeal glu-tRNAgln amidotransferase subunit D {ECO:0000313|EMBL:ESS05259.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
asparaginase/glutaminase
sw_4_scaffold_1505_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(9081..9797)
DNA (717bp) protein (239aa)
taurine-transporting AtPase (EC:3.6.3.36)
ABC transporter ATP-binding protein n=1 Tax=Brevibacillus panacihumi W25 RepID=V6MAV1_9BACL
ABC transporter-like protein; K02049 NitT/TauT family transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
sw_4_scaffold_1505_12

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comp(9797..10621)
DNA (825bp) protein (275aa)
ABC transporter permease n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B33919
Binding-protein-dependent transporter inner membrane protein (ABC.SN.P) {ECO:0000313|EMBL:AIF14556.1}; TaxID=1456236 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marin
ABC transporter permease
sw_4_scaffold_1505_13
Dolosigranulum pigrum, Dolosigranulum, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(10627..11763)
DNA (1137bp) protein (379aa)
Putative uncharacterized protein n=1 Tax=Dolosigranulum pigrum ATCC 51524 RepID=H3NCG6_9LACT
Uncharacterized protein {ECO:0000313|EMBL:EHR35399.1}; TaxID=883103 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Dolosigranulum.;" source="Dolosigranulum pigrum ATCC 515
ABC transporter substrate-binding protein
sw_4_scaffold_1505_14
Thermococcus kodakarensis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(12231..12728)
DNA (498bp) protein (166aa)
Transcription regulator, Lrp/AsnC family n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JGG7_THEKO
Lrp/AsnC family transcription regulator
Transcription regulator, Lrp/AsnC family {ECO:0000313|EMBL:BAD85399.1}; TaxID=69014 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus
sw_4_scaffold_1505_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(12808..13431)
DNA (624bp) protein (208aa)
isochorismatase family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
isochorismatase hydrolase id=14627780 bin=bin7_NC10_sister species=Hoeflea phototrophica genus=Hoeflea taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
isochorismatase hydrolase
sw_4_scaffold_1505_16
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

13572..14093
DNA (522bp) protein (174aa)
Xaa-Pro dipeptidase; K01271 Xaa-Pro dipeptidase [EC:3.4.13.9] Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
hypothetical protein n=1 Tax=Gordonia kroppenstedtii RepID=UPI00035D652A
Displaying 16 items

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