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sw_4_scaffold_1576

Search features with annotation key words

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_1576_1
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1..231
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZZ61_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJN58318.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_4_scaffold_1576_2
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(257..550)
DNA (294bp) protein (98aa)
GtrA family protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QVG1_9EURY
GtrA family protein {ECO:0000313|EMBL:EFW91483.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus D
sw_4_scaffold_1576_3
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2008..2418
DNA (411bp) protein (137aa)
Rieske [2Fe-2S] domain containing oxidoreductase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUH7_9EURY
Rieske [2Fe-2S] domain containing oxidoreductase {ECO:0000313|EMBL:EFW92256.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="H
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase
sw_4_scaffold_1576_4
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2468..3079)
DNA (612bp) protein (204aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS00054797}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00239};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS0005
cmk1; cytidylate kinase (EC:2.7.4.25)
Cytidylate kinase n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TYK7_9EURY
sw_4_scaffold_1576_5
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3159..5942)
DNA (2784bp) protein (928aa)
Peptidase M14 carboxypeptidase A n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X856_9EURY
Peptidase M14 carboxypeptidase A {ECO:0000313|EMBL:ELY56818.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amyloly
peptidase M14 carboxypeptidase A
sw_4_scaffold_1576_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6574..7872
DNA (1299bp) protein (433aa)
cyc; unspecific monooxygenase (cytochrome P450) (EC:1.14.14.1)
Cytochrome P450 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IR83_NATPD
Cytochrome P450 {ECO:0000313|EMBL:CAI49361.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain ATC
sw_4_scaffold_1576_7
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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7986..8642
DNA (657bp) protein (219aa)
Alkylmercury lyase n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RTJ5_HALTV
alkylmercury lyase
Alkylmercury lyase {ECO:0000313|EMBL:ADB59038.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strain ATC
sw_4_scaffold_1576_8
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8700..9341
DNA (642bp) protein (214aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LFC3_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:EMA31124.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Ha
Bacterio-opsin activator HTH domain-containing protein
sw_4_scaffold_1576_9
unknown

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comp(9389..9649)
DNA (261bp) protein (87aa)

This feature has no annotations

sw_4_scaffold_1576_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10758..11444)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRT4_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36961.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_4_scaffold_1576_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11641..13284)
DNA (1644bp) protein (548aa)
Putative signal-transducing histidine kinase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4K2_9EURY
Putative signal-transducing histidine kinase {ECO:0000313|EMBL:ELZ29607.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosi
hypothetical protein
sw_4_scaffold_1576_12
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(13516..13944)
DNA (429bp) protein (143aa)
deoxycytidine triphosphate deaminase id=24618610 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
Uncharacterized protein {ECO:0000313|EMBL:ERH06217.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
deoxycytidine triphosphate deaminase
sw_4_scaffold_1576_13
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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14052..15158
DNA (1107bp) protein (369aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YZR8_9EURY
NADH:flavin oxidoreductase
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:ELY78952.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum
sw_4_scaffold_1576_14
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15164..16579)
DNA (1416bp) protein (472aa)
MATE efflux family protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LV90_9EURY
MATE efflux family protein {ECO:0000313|EMBL:EMA37063.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
MATE efflux family protein
sw_4_scaffold_1576_15
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(16693..19260)
DNA (2568bp) protein (856aa)
Putative DNA binding protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D9M7_9EURY
Putative DNA binding protein {ECO:0000313|EMBL:ELZ31422.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum palli
PAS/PAC sensor protein
sw_4_scaffold_1576_16
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19371..21242)
DNA (1872bp) protein (624aa)
WGS CADB00000000 data, contig 91 (Fragment) n=1 Tax=Leishmania mexicana (strain MHOM/GT/2001/U1103) RepID=E8NHR5_LEIMU
Uncharacterized protein {ECO:0000313|EMBL:GAO02104.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
translation initiation factor IF-2
sw_4_scaffold_1576_17
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22301..23662)
DNA (1362bp) protein (454aa)
purF; amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
Amidophosphoribosyltransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPM2_NATM8
sw_4_scaffold_1576_18
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(23810..23983)
DNA (174bp) protein (58aa)
50S ribosomal protein L37e n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y0L4_NATM8
rpl37e; 50S ribosomal protein L37e
50S ribosomal protein L37e {ECO:0000256|HAMAP-Rule:MF_00547, ECO:0000256|SAAS:SAAS00257304}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas
sw_4_scaffold_1576_19
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23980..24192)
DNA (213bp) protein (71aa)
RNA-binding protein Lsm n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INQ7_NATPD
snRNP-like protein
RNA-binding protein Lsm {ECO:0000313|EMBL:CAI50245.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_4_scaffold_1576_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24235..24423
DNA (189bp) protein (63aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000313|EMBL:CBH24777.1}; EC=6.3.5.- {ECO:0000313|EMBL:CBH24777.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae
gatA; glutamyl-tRNA(Gln) amidotransferase subunit A
glutamyl-tRNA(Gln) amidotransferase subunit A id=24659613 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Displaying 20 items

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