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sw_4_scaffold_176

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_176_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1..1344
DNA (1344bp) protein (448aa)
30S ribosomal protein S1
30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 id=24659748 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribosomal protein S1, putative {ECO:0000313|EMBL:ABC44287.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
sw_4_scaffold_176_2
unknown

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comp(1223..1978)
DNA (756bp) protein (252aa)

This feature has no annotations

sw_4_scaffold_176_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2017..3441
DNA (1425bp) protein (475aa)
NAD-dependent malic enzyme; K00027 malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] id=24659747 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Malic oxidoreductase
Malic oxidoreductase {ECO:0000313|EMBL:CBH24919.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (
sw_4_scaffold_176_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3480..4262
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA63_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24918.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_176_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4644..4991
DNA (348bp) protein (116aa)
hypothetical protein
hypothetical protein id=24659745 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC43979.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_176_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5169..5477
DNA (309bp) protein (103aa)
hypothetical protein
hypothetical protein id=24659744 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24916.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_176_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5606..7093)
DNA (1488bp) protein (496aa)
Aldehyde dehydrogenase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA60_SALRM
aldHT; Aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:CBH24915.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
sw_4_scaffold_176_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7296..8504
DNA (1209bp) protein (403aa)
aspC; aspartate aminotransferase; K10907 aminotransferase [EC:2.6.1.-] id=24659742 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Aspartate aminotransferase {ECO:0000313|EMBL:CBH24914.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CBH24914.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermac
aspC; aspartate aminotransferase
sw_4_scaffold_176_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8718..9770
DNA (1053bp) protein (351aa)
prfB; peptide chain release factor 2
prfB; peptide chain release factor 2; K02836 peptide chain release factor 2 id=24659741 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
sw_4_scaffold_176_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10130..10597
DNA (468bp) protein (156aa)
hypothetical protein; K09748 ribosome maturation factor RimP id=24659740 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
sw_4_scaffold_176_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10664..12376
DNA (1713bp) protein (571aa)
N utilization substance protein A n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1N6_SALRD
nusA; transcription elongation factor NusA
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
sw_4_scaffold_176_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12448..15348
DNA (2901bp) protein (967aa)
Translation initiation factor IF-2 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA55_SALRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermac
infB; translation initiation factor IF-2
sw_4_scaffold_176_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15424..15822
DNA (399bp) protein (133aa)
rbfA; ribosome-binding factor A
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A id=24659737 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000313|EMBL:CBH24909.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
sw_4_scaffold_176_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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15819..16592
DNA (774bp) protein (258aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
tRNA pseudouridine synthase B n=1 Tax=Salisaeta longa RepID=UPI0003B743E4
tRNA pseudouridine synthase B
sw_4_scaffold_176_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16611..17546
DNA (936bp) protein (312aa)
ribF; riboflavin biosynthesis protein RibF; K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] id=24659736 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=309807 species="Bacteria; Bacteroidete
ribF; riboflavin biosynthesis protein RibF
sw_4_scaffold_176_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


17667..17933
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=2 Tax=Salinibacter ruber RepID=RS15_SALRD
rpsO; 30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000255|HAMAP-Rule:MF_01343}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_4_scaffold_176_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18077..20230
DNA (2154bp) protein (718aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000313|EMBL:CBH24906.1}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000313|EMBL:CBH24906.1};; Polynucleotide pho
Polyribonucleotide nucleotidyltransferase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA51_SALRM
pnpA; polyribonucleotide nucleotidyltransferase
sw_4_scaffold_176_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20388..21374
DNA (987bp) protein (329aa)
galE; UDP-glucose 4-epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] id=24659733 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
UDP-glucose 4-epimerase {ECO:0000313|EMBL:ABC45272.1}; EC=5.1.3.2 {ECO:0000313|EMBL:ABC45272.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
galE; UDP-glucose 4-epimerase
sw_4_scaffold_176_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21460..22548
DNA (1089bp) protein (363aa)
Segregation and condensation protein A n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA49_SALRM
scpA; segregation and condensation protein A
Segregation and condensation protein A {ECO:0000256|SAAS:SAAS00093938, ECO:0000313|EMBL:CBH24904.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermac
sw_4_scaffold_176_20
GWF2_Planctomycetes_40_8_curated, Planctomycetes, Bacteria

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comp(22381..22776)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034A16BA
hypothetical protein Tax=GWF2_Planctomycetes_40_8_curated
hypothetical protein
sw_4_scaffold_176_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23085..24113
DNA (1029bp) protein (343aa)
hypothetical protein id=24659731 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24903.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
Displaying 21 items

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