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sw_4_scaffold_1958

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_1958_trna_1
unknown

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29..99
DNA (71bp)
transferRNA
sw_4_scaffold_1958_1
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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284..1405
DNA (1122bp) protein (374aa)
Site-specific recombinase xerd n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CU34_9EURY
Site-specific recombinase xerd {ECO:0000313|EMBL:ELZ25912.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola
site-specific recombinase xerd
sw_4_scaffold_1958_2
unknown

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1433..1651
DNA (219bp) protein (73aa)

This feature has no annotations

sw_4_scaffold_1958_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1629..2213
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPE0_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50011.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_4_scaffold_1958_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2228..2473
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPE0_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50011.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_4_scaffold_1958_5
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2591..3673
DNA (1083bp) protein (361aa)
hel1; ATP-dependent helicase (EC:3.6.1.-)
ATP-dependent helicase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J9F4_HALVA
ATP-dependent helicase {ECO:0000313|EMBL:EMA05606.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
sw_4_scaffold_1958_6
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3724..4926
DNA (1203bp) protein (401aa)
hel1; ATP-dependent helicase (EC:3.6.1.-)
ATP-dependent helicase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J9F4_HALVA
ATP-dependent helicase {ECO:0000313|EMBL:EMA05606.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
sw_4_scaffold_1958_7
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4931..5836)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J919_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA05607.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_4_scaffold_1958_8
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5879..6502
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NEP7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA56008.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_4_scaffold_1958_9
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6925..7752)
DNA (828bp) protein (276aa)
Integrase family protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18F90_HALWD
int; phage integrase
Integrase family protein {ECO:0000313|EMBL:CAJ53368.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strai
sw_4_scaffold_1958_10
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7769..8200)
DNA (432bp) protein (144aa)
Integrase family protein n=2 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GWE4_HALVD
XerC/D-like integrase
Integrase family protein {ECO:0000313|EMBL:ADE04239.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATCC
sw_4_scaffold_1958_11
unknown

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comp(8542..8811)
DNA (270bp) protein (90aa)

This feature has no annotations

sw_4_scaffold_1958_12
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(9603..11072)
DNA (1470bp) protein (490aa)
Glutamyl-tRNA amidotransferase subunit A n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W8K0_9EURY
glutamyl-tRNA amidotransferase subunit A rbh
Glutamyl-tRNA amidotransferase subunit A {ECO:0000313|EMBL:AGN01868.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum
sw_4_scaffold_1958_13
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11183..11653)
DNA (471bp) protein (157aa)
Orc1-type DNA replication protein n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GWF2_HALVD
orc11; Orc1-type DNA replication protein
Orc1-type DNA replication protein {ECO:0000313|EMBL:ADE02948.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (str
sw_4_scaffold_1958_14
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11666..12223)
DNA (558bp) protein (186aa)
Orc1-type DNA replication protein n=1 Tax=Haloferax alexandrinus JCM 10717 RepID=M0HWP5_9EURY
Orc1-type DNA replication protein {ECO:0000313|EMBL:ELZ88153.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexandrinus
orc11; Orc1-type DNA replication protein
Displaying 15 items

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