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sw_4_scaffold_2010

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_2010_1
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1..684)
DNA (684bp) protein (228aa)
Glycine betaine transporter n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D9S4_9EURY
Glycine betaine transporter {ECO:0000313|EMBL:ELZ31467.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallid
glycine/betaine ABC transporter
sw_4_scaffold_2010_2

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1070..1252
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y7A4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS06937.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
sw_4_scaffold_2010_3
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1345..1788)
DNA (444bp) protein (148aa)
Universal stress protein n=2 Tax=Haloarcula hispanica RepID=G0I0A6_HALHT
universal stress protein
Universal stress protein UspA {ECO:0000313|EMBL:AHB68182.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica
sw_4_scaffold_2010_4
unknown

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comp(1882..2061)
DNA (180bp) protein (60aa)

This feature has no annotations

sw_4_scaffold_2010_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2253..2621
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDA3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43752.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
sw_4_scaffold_2010_6
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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2702..3157
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NKJ1_MARHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB12651.1}; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (st
sw_4_scaffold_2010_7
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3331..3996)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036DFFF8
hypothetical protein Tax=GWF2_Verrucomicrobia_62_7_curated
sw_4_scaffold_2010_8

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comp(4003..4176)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=gut metagenome RepID=J9FN32_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EJW96351.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
sw_4_scaffold_2010_9
unknown

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comp(4207..4437)
DNA (231bp) protein (77aa)

This feature has no annotations

sw_4_scaffold_2010_10

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4477..4929
DNA (453bp) protein (151aa)
Formate-tetrahydrofolate ligase {ECO:0000313|EMBL:ESS06943.1}; EC=6.3.4.3 {ECO:0000313|EMBL:ESS06943.1};; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;
fhs; formyltetrahydrofolate synthetase (EC:6.3.4.3)
Formate-tetrahydrofolate ligase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XXE2_9ARCH
sw_4_scaffold_2010_11
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4944..5342
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TWZ5_9EURY
FAD binding domain protein {ECO:0000313|EMBL:AID28287.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium h
berberine and berberine-like family protein
sw_4_scaffold_2010_12
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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5442..6323
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TWZ5_9EURY
FAD linked oxidase {ECO:0000313|EMBL:ELZ20477.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891.;"
FAD linked oxidase domain-containing protein
sw_4_scaffold_2010_13
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6430..6999)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X8Q9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY58139.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
hypothetical protein
sw_4_scaffold_2010_14
unknown

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comp(7554..7832)
DNA (279bp) protein (93aa)

This feature has no annotations

sw_4_scaffold_2010_15
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7853..9121
DNA (1269bp) protein (423aa)
Formate dehydrogenase subunit alpha n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J2V6_HALJB
formate dehydrogenase subunit alpha
Formate dehydrogenase subunit alpha {ECO:0000313|EMBL:ELY34918.1}; Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:ADJ15063.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halob
Displaying 15 items

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