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sw_4_scaffold_2016

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_2016_1
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1..249
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DWW4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK40824.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
sw_4_scaffold_2016_2
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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434..796
DNA (363bp) protein (121aa)
mannose-6-phosphate isomerase n=1 Tax=Halorubrum sp. T3 RepID=UPI0003626CC5
Uncharacterized protein {ECO:0000313|EMBL:ELZ40710.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_4_scaffold_2016_3
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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851..2062
DNA (1212bp) protein (404aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1033806 species="Archaea; Eu
Histidine--tRNA ligase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PNF9_9EURY
histidyl-tRNA synthetase
sw_4_scaffold_2016_4
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2398..2673
DNA (276bp) protein (92aa)
Uncharacterized protein n=4 Tax=Haloferax RepID=D4GZ36_HALVD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ93765.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexandrinus JCM 10717
sw_4_scaffold_2016_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2687..3514
DNA (828bp) protein (276aa)
truA; tRNA pseudouridine synthase TruA (EC:5.4.99.12)
tRNA pseudouridine synthase {ECO:0000256|RuleBase:RU003792}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003792};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
tRNA pseudouridine synthase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XK75_NATM8
sw_4_scaffold_2016_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3552..5237
DNA (1686bp) protein (562aa)
pepF; oligoendopeptidase (EC:3.4.24.-)
Oligoendopeptidase PepF {ECO:0000313|EMBL:CAI50611.1}; EC=3.4.24.- {ECO:0000313|EMBL:CAI50611.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natron
Oligoendopeptidase PepF n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMP7_NATPD
sw_4_scaffold_2016_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5323..6537
DNA (1215bp) protein (405aa)
Proteasome-activating nucleotidase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMP8_NATPD
pan_1; proteasome-activating nucleotidase
Proteasome-activating nucleotidase {ECO:0000256|HAMAP-Rule:MF_00553}; Short=PAN {ECO:0000256|HAMAP-Rule:MF_00553};; Proteasomal ATPase {ECO:0000256|HAMAP-Rule:MF_00553}; Proteasome regulatory ATPase {
sw_4_scaffold_2016_8
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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6706..7647
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RYQ8_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB59959.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
sw_4_scaffold_2016_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7921..8685)
DNA (765bp) protein (255aa)
UPF0447 protein NP_2262A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Y2262_NATPD
hypothetical protein
Putative heme-binding protein NP_2262A; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain ATCC 35678
sw_4_scaffold_2016_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9068..10054)
DNA (987bp) protein (329aa)
UPF0447 family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XN90_NATM8
UPF0447 family protein
Heme-binding protein HemQ {ECO:0000313|EMBL:CCQ35371.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis
sw_4_scaffold_2016_11
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10553..12322)
DNA (1770bp) protein (590aa)
M50 family metalloprotease {ECO:0000313|EMBL:CCQ35374.1}; EC=3.4.24.- {ECO:0000313|EMBL:CCQ35374.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Nat
Probable metalloprotease n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XZ07_NATM8
probable metalloprotease
sw_4_scaffold_2016_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12376..14013)
DNA (1638bp) protein (546aa)
lysS; lysine--tRNA ligase (EC:6.1.1.6)
Lysine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000255|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00177}; Short=LysRS {ECO:0000255|HAMAP-Rule:MF_00
Lysine--tRNA ligase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=SYK_NATPD
sw_4_scaffold_2016_13
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(14006..14533)
DNA (528bp) protein (176aa)
pyrH; uridylate kinase (EC:2.7.4.22)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00055191}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00055
Uridylate kinase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XN92_NATM8
Displaying 13 items

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