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sw_4_scaffold_2042

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_2042_1
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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700..1677
DNA (978bp) protein (326aa)
Universal stress protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QVP6_9EURY
Universal stress protein {ECO:0000313|EMBL:EFW91309.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophi
UspA domain protein
sw_4_scaffold_2042_2
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1789..2088)
DNA (300bp) protein (100aa)
hypothetical protein
id=24628679 bin=Haloquadratum_Walsbyi_J07HWQ1 tax=Haloquadratum_Walsbyi_J07HWQ1
Uncharacterized protein {ECO:0000313|EMBL:CAJ52076.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
sw_4_scaffold_2042_3
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2085..2468)
DNA (384bp) protein (128aa)
ArsR family transcription regulator id=24632702 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
Uncharacterized protein {ECO:0000313|EMBL:ERG94476.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
ArsR family transcription regulator
sw_4_scaffold_2042_4
unknown

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2775..2936
DNA (162bp) protein (54aa)

This feature has no annotations

sw_4_scaffold_2042_5
unknown

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3222..3362
DNA (141bp) protein (47aa)

This feature has no annotations

sw_4_scaffold_2042_6
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3539..3970)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0ENI1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA58180.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13561.;
hypothetical protein
sw_4_scaffold_2042_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4057..5001
DNA (945bp) protein (315aa)
Dehydrogenase n=1 Tax=halophilic archaeon J07HX64 RepID=U1QRJ5_9EURY
Dehydrogenase {ECO:0000313|EMBL:ERH08312.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
fabG; oxidoreductase
sw_4_scaffold_2042_8
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5003..5257
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V5I0_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV45222.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
sw_4_scaffold_2042_9
unknown

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comp(5380..6192)
DNA (813bp) protein (271aa)

This feature has no annotations

sw_4_scaffold_2042_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6331..7287
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CMG1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23572.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_4_scaffold_2042_11
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7414..8073
DNA (660bp) protein (220aa)
Homolog to ribonuclease Z n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPK5_NATM8
homolog to ribonuclease Z
Homolog to ribonuclease Z {ECO:0000313|EMBL:CCQ35983.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis
sw_4_scaffold_2042_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8294..9298
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CMG1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23572.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_4_scaffold_2042_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10250..10606)
DNA (357bp) protein (119aa)
Protein pelota homolog {ECO:0000255|HAMAP-Rule:MF_01853}; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_01853};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Protein pelota homolog n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=PELO_NATPD
Suspect SCG annotation. See neighboring gene [sw_4_scaffold_2042_14].
pelA; cell division protein pelota
sw_4_scaffold_2042_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10600..11175)
DNA (576bp) protein (192aa)
Protein pelota homolog {ECO:0000255|HAMAP-Rule:MF_01853}; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_01853};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Protein pelota homolog n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=PELO_NATPD
pelA; cell division protein pelota
sw_4_scaffold_2042_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11198..11581)
DNA (384bp) protein (128aa)
DUF4013 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INP0_NATPD
hypothetical protein
DUF4013 family protein {ECO:0000313|EMBL:CAI50262.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (str
Displaying 15 items

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