ggKbase home page

sw_4_scaffold_2126

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_2126_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(94..963)
DNA (870bp) protein (290aa)
korB1; oxoglutarate--ferredoxin oxidoreductase beta subunit (EC:1.2.7.3)
Oxoglutarate--ferredoxin oxidoreductase beta subunit {ECO:0000313|EMBL:CCQ37240.1}; EC=1.2.7.3 {ECO:0000313|EMBL:CCQ37240.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacterial
Oxoglutarate--ferredoxin oxidoreductase beta subunit n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y505_NATM8
sw_4_scaffold_2126_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(960..2732)
DNA (1773bp) protein (591aa)
korA; oxoglutarate--ferredoxin oxidoreductase, alpha subunit (EC:1.2.7.3)
Oxoglutarate--ferredoxin oxidoreductase alpha subunit {ECO:0000313|EMBL:CAI48707.1}; EC=1.2.7.3 {ECO:0000313|EMBL:CAI48707.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteria
Oxoglutarate--ferredoxin oxidoreductase alpha subunit n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT27_NATPD
sw_4_scaffold_2126_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2893..3540
DNA (648bp) protein (216aa)
FAD-dependent oxidoreductase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLF3_NATM8
FAD-dependent oxidoreductase
FAD-dependent oxidoreductase {ECO:0000313|EMBL:CCQ37615.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapen
sw_4_scaffold_2126_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3596..3979)
DNA (384bp) protein (128aa)
glo_2; lyase / dioxygenase 2 ( lactoylglutathione lyase, aromatic compounds dioxygenase ) (EC:4.4.1.5 1.13.11.-)
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:CAI48705.1}; EC=5.1.99.1 {ECO:0000313|EMBL:CAI48705.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Na
Methylmalonyl-CoA epimerase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT29_NATPD
sw_4_scaffold_2126_5
unknown

Not on your lists

4292..4447
DNA (156bp) protein (52aa)

This feature has no annotations

sw_4_scaffold_2126_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4378..6054)
DNA (1677bp) protein (559aa)
mcmA_2; methylmalonyl-CoA mutase, subunit A 2 (EC:5.4.99.2)
Methylmalonyl-CoA mutase subunit A {ECO:0000313|EMBL:CAI48704.2}; EC=5.4.99.2 {ECO:0000313|EMBL:CAI48704.2};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriac
Methylmalonyl-CoA mutase subunit A n=2 Tax=Natronomonas pharaonis RepID=Q3IT30_NATPD
sw_4_scaffold_2126_7
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6119..6358
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0DZX0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ40247.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 1
hypothetical protein
sw_4_scaffold_2126_8
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6355..6768
DNA (414bp) protein (138aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0DP93_9EURY
sw_4_scaffold_2126_9
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7051..8550)
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3EY47_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60167.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
peptidase S8/S53 subtilisin kexin sedolisin
sw_4_scaffold_2126_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9017..9598)
DNA (582bp) protein (194aa)
GNAT family acetyltransferase {ECO:0000313|EMBL:CAI48828.1}; EC=2.3.1.- {ECO:0000313|EMBL:CAI48828.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; N
GNAT family acetyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISQ7_NATPD
acetyltransferase
sw_4_scaffold_2126_11
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9690..11579
DNA (1890bp) protein (630aa)
AMP-dependent synthetase and ligase n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JMX8_NATP1
acyl-CoA synthetase/AMP-acid ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ELY75625.1}; Acyl-CoA synthetase/AMP-acid ligase {ECO:0000313|EMBL:AGB32865.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natria
sw_4_scaffold_2126_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12188..13945)
DNA (1758bp) protein (586aa)
Prolyl oligopeptidase family protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CKA7_9EURY
Prolyl oligopeptidase family protein {ECO:0000313|EMBL:ELZ22802.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex ca
dipeptidyl aminopeptidase/acylaminoacyl peptidase
Displaying 12 items

View Taxonomy