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sw_4_scaffold_2334

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_2334_1
unknown

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comp(172..699)
DNA (528bp) protein (176aa)

This feature has no annotations

sw_4_scaffold_2334_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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806..1453
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPN2_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI49918.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_4_scaffold_2334_3
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1500..1859)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D6L2_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH37752.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 1
sw_4_scaffold_2334_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1856..3010)
DNA (1155bp) protein (385aa)
acaB1; acetyl-CoA C-acyltransferase (EC:2.3.1.16)
Acetyl-CoA C-acetyltransferase catalytic subunit {ECO:0000313|EMBL:CCQ36870.1}; EC=2.3.1.9 {ECO:0000313|EMBL:CCQ36870.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
Acetyl-CoA C-acyltransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XL09_NATM8
sw_4_scaffold_2334_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3611..4768
DNA (1158bp) protein (386aa)
ABC-type transport system ATP-binding protein (Probable substrate iron) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPN5_NATPD
abc24a; spermidine/putrescine/iron ABC transporter ATP-binding protein
ABC-type transport system ATP-binding protein {ECO:0000313|EMBL:CAI49915.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natr
sw_4_scaffold_2334_6
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4955..5770)
DNA (816bp) protein (272aa)
Metal-dependent hydrolase, beta-lactamase superfamily II n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NUQ1_HALBP
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AJF28010.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_4_scaffold_2334_7
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5776..6375)
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI0003776123
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF28009.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_4_scaffold_2334_8
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6496..7317)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI0003108BA0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF28081.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_4_scaffold_2334_9
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7343..8071)
DNA (729bp) protein (243aa)
Putative HMP/thiamine import ATP-binding protein YkoD {ECO:0000313|EMBL:KJL36600.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJL36600.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbact
cobalt ABC transporter ATPase n=1 Tax=Paenibacillus sp. JC66 RepID=UPI000289B8A3
cobalt ABC transporter ATPase
sw_4_scaffold_2334_10
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

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comp(8077..9078)
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI000315B803
cobalt ABC transporter ATPase; K02006 cobalt/nickel transport system ATP-binding protein Tax=RBG_16_Actinobacteria_64_13_curated
ABC transporter ATP-binding protein
sw_4_scaffold_2334_11
unknown

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9404..9517
DNA (114bp) protein (38aa)

This feature has no annotations

sw_4_scaffold_2334_12
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9581..10408
DNA (828bp) protein (276aa)
Metal-dependent hydrolase, beta-lactamase superfamily II n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NUQ1_HALBP
beta-lactamase rbh
Beta-lactamase {ECO:0000313|EMBL:AJF28010.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_4_scaffold_2334_13
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10486..11073)
DNA (588bp) protein (196aa)
AsnC family transcriptional regulator n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L393_9EURY
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:AJF28011.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp
Displaying 13 items

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