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sw_4_scaffold_2524

Search features with annotation key words

Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_2524_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..368
DNA (366bp) protein (122aa)
MmgE/PrpD family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLD3_NATM8
MmgE/PrpD family protein
MmgE/PrpD family protein {ECO:0000313|EMBL:CCQ37511.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis
sw_4_scaffold_2524_2
Streptomyces collinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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365..949
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Streptomyces collinus Tu 365 RepID=S5V3Q4_STRCU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGS72411.1}; TaxID=1214242 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces collinus Tu 365.;"
sw_4_scaffold_2524_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1405..2379
DNA (975bp) protein (325aa)
PAS domain S-box id=24648091 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
PAS sensor histidine kinase {ECO:0000313|EMBL:ERH09218.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
multi-sensor signal transduction histidine kinase
sw_4_scaffold_2524_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2366..3064
DNA (699bp) protein (233aa)
Fumarylacetoacetase family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSY0_NATM8
fumarylacetoacetase family protein
Fumarylacetoacetase family protein {ECO:0000313|EMBL:CCQ37510.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas mo
sw_4_scaffold_2524_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3236..3679)
DNA (444bp) protein (148aa)
UspA domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IR73_NATPD
stress response protein
UspA domain protein {ECO:0000313|EMBL:CAI49371.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_4_scaffold_2524_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3778..4128
DNA (351bp) protein (117aa)
ArsR family transcription regulator n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IR74_NATPD
transcription regulator
ArsR family transcription regulator {ECO:0000313|EMBL:CAI49370.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas p
sw_4_scaffold_2524_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4176..4466
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IR75_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI49369.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_4_scaffold_2524_8
unknown

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comp(4463..4660)
DNA (198bp) protein (66aa)

This feature has no annotations

sw_4_scaffold_2524_9
unknown

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4752..4946
DNA (195bp) protein (65aa)

This feature has no annotations

sw_4_scaffold_2524_10
unknown

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comp(4953..5138)
DNA (186bp) protein (62aa)

This feature has no annotations

sw_4_scaffold_2524_11
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5166..5534
DNA (369bp) protein (123aa)
Kinase n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NKT8_9EURY
Kinase {ECO:0000313|EMBL:EMA57300.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 21995.;"
kinase
sw_4_scaffold_2524_12
unknown

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5661..6449
DNA (789bp) protein (263aa)

This feature has no annotations

sw_4_scaffold_2524_13
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6683..7045
DNA (363bp) protein (121aa)
Dual specificity protein phosphatase n=2 Tax=Halorubrum distributum RepID=M0EPU4_9EURY
Dual specificity protein phosphatase {ECO:0000313|EMBL:ELZ49730.1}; TaxID=1227467 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distrib
sw_4_scaffold_2524_14
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7020..7262)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TUT3_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ71843.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium gregoryi (s
sw_4_scaffold_2524_15
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7267..7506)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XK71_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35372.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_4_scaffold_2524_16
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7736..8509
DNA (774bp) protein (258aa)
ABC transporter periplasmic binding component id=24619468 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:ERH06883.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae
ABC transporter periplasmic binding component
sw_4_scaffold_2524_17
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8618..9070
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J8F0_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA04603.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_4_scaffold_2524_18
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9134..10045)
DNA (912bp) protein (304aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
elaC; ribonuclease Z (RNase Z) (tRNA 3 endonuclease) (EC:3.1.26.11)
Ribonuclease Z n=1 Tax=halophilic archaeon J07HX5 RepID=U1MFT5_9EURY
sw_4_scaffold_2524_19
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10194..10997)
DNA (804bp) protein (268aa)
hypothetical protein, partial n=1 Tax=Frankia sp. BCU110501 RepID=UPI000374D428
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAE46254.1}; TaxID=234621 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis (strain PR4 / NB
sw_4_scaffold_2524_20

Not on your lists

comp(11239..13614)
DNA (2376bp) protein (792aa)
helicase (EC:3.6.1.-)
Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster (Fragment) n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y2X4_9ARCH
Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster {ECO:0000313|EMBL:ESS06986.1}; Flags: Fragment;; TaxID=1412872 species="Archaea; environmental sampl
sw_4_scaffold_2524_21
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13611..14498)
DNA (888bp) protein (296aa)
Putative exonuclease (Fragment) n=1 Tax=halophilic archaeon J07HX5 RepID=U1MZ12_9EURY
Putative exonuclease {ECO:0000313|EMBL:ERG89405.1}; Flags: Fragment;; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
Displaying 21 items

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