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sw_4_scaffold_253

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_253_1
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..338
DNA (336bp) protein (112aa)
exopolyphosphatase id=24614633 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Exopolyphosphatase {ECO:0000313|EMBL:ESP88863.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum t
exopolyphosphatase-like enzyme
sw_4_scaffold_253_2
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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457..1548
DNA (1092bp) protein (364aa)
Aldo/keto reductase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JFP4_HALVA
Aldo/keto reductase {ECO:0000313|EMBL:EMA06829.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 297
aldo/keto reductase
sw_4_scaffold_253_3
unknown

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comp(1756..2139)
DNA (384bp) protein (128aa)

This feature has no annotations

sw_4_scaffold_253_4
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(2078..3166)
DNA (1089bp) protein (363aa)
Mannan endo-1,4-beta-mannosidase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VUW4_9EURY
Mannan endo-1,4-beta-mannosidase
Mannan endo-1,4-beta-mannosidase {ECO:0000313|EMBL:AGN01025.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Har
sw_4_scaffold_253_5
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3401..4957)
DNA (1557bp) protein (519aa)
Secreted protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J8I5_HALVA
Secreted protein {ECO:0000313|EMBL:EMA04648.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 29715.
hypothetical protein
sw_4_scaffold_253_6
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(5532..5774)
DNA (243bp) protein (81aa)
Transcriptional regulator n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LPI7_9EURY
Transcriptional regulator {ECO:0000313|EMBL:EMA35462.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JC
transcriptional regulator
sw_4_scaffold_253_7
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5875..7152)
DNA (1278bp) protein (426aa)
IS1341-type transposase (TCE31) n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JSP2_HALVA
IS1341-type transposase (TCE31) {ECO:0000313|EMBL:EMA11398.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismor
transposase IS605
sw_4_scaffold_253_8
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7149..7292)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SPI9_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERG88560.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
sw_4_scaffold_253_9
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7662..8768)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HZ22_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ88952.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513
sw_4_scaffold_253_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9702..10856
DNA (1155bp) protein (385aa)
Major facilitator superfamily transporter n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMF7_NATPD
tp19; major facilitator transporter
Major facilitator superfamily transport protein {ECO:0000313|EMBL:CAI50701.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Na
sw_4_scaffold_253_11
unknown

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10933..11118
DNA (186bp) protein (62aa)

This feature has no annotations

sw_4_scaffold_253_12

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comp(11242..12717)
DNA (1476bp) protein (492aa)
Lignostilbene-alpha,beta-dioxygenase related enzyme n=1 Tax=uncultured archaeon A07HR67 RepID=V4XQN4_9ARCH
retinal pigment epithelial membrane protein
Lignostilbene-alpha,beta-dioxygenase related enzyme {ECO:0000313|EMBL:ESS02326.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
sw_4_scaffold_253_13
unknown

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comp(12742..13140)
DNA (399bp) protein (133aa)

This feature has no annotations

sw_4_scaffold_253_14
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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13251..13958
DNA (708bp) protein (236aa)
GTP cyclohydrolase III {ECO:0000256|HAMAP-Rule:MF_00608, ECO:0000313|EMBL:ELZ49627.1}; EC=3.5.4.29 {ECO:0000256|HAMAP-Rule:MF_00608, ECO:0000313|EMBL:ELZ49627.1};; TaxID=1227466 species="Archaea; Eury
gch3; GTP cyclohydrolase III (EC:3.5.4.29)
GTP cyclohydrolase III n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0ERV5_9EURY
sw_4_scaffold_253_15
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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13951..14961
DNA (1011bp) protein (337aa)
tdh; oxidoreductase ( Zn-dependent dehydrogenases, threonine 3-dehydrogenase) (EC:1.1.1.103)
Oxidoreductase n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0ERB9_9EURY
Oxidoreductase {ECO:0000313|EMBL:ELZ49628.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;"
sw_4_scaffold_253_16
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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14965..15381
DNA (417bp) protein (139aa)
6-pyruvoyl-tetrahydropterin synthase n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0ET83_9EURY
6-pyruvoyl-tetrahydropterin synthase {ECO:0000313|EMBL:ELZ49629.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriens
6-pyruvoyltetrahydropterin synthase
sw_4_scaffold_253_17
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15378..15608
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:ELZ49630.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
sw_4_scaffold_253_18

Not on your lists

15637..16095
DNA (459bp) protein (153aa)
act1; acyl-CoA thioester hydrolase (EC:3.1.2.-)
Acyl-CoA hydrolase n=1 Tax=uncultured archaeon A07HR67 RepID=V4XWC2_9ARCH
Acyl-CoA hydrolase {ECO:0000313|EMBL:ESS02837.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
sw_4_scaffold_253_19
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16227..16388)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUL5_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48165.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
Displaying 19 items

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