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sw_4_scaffold_254

Search features with annotation key words

Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_254_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

162..629
DNA (468bp) protein (156aa)
Membrane-bound metal-dependent hydrolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N725_9EURY
Membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:EMA53666.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
membrane-bound metal-dependent hydrolase
sw_4_scaffold_254_2
unknown

Not on your lists

626..1402
DNA (777bp) protein (259aa)

This feature has no annotations

sw_4_scaffold_254_3
unknown

Not on your lists

comp(1399..2025)
DNA (627bp) protein (209aa)

This feature has no annotations

sw_4_scaffold_254_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2255..3814
DNA (1560bp) protein (520aa)
Permease n=3 Tax=Halococcus hamelinensis RepID=M0M187_9EURY
Permease {ECO:0000313|EMBL:EMA38379.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
lolC; putative (lipoprotein-releasing system) permease
sw_4_scaffold_254_5
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3908..4606
DNA (699bp) protein (233aa)
ABC transporter n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M1V0_9EURY
ABC transporter {ECO:0000313|EMBL:EMA38380.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
ABC transporter
sw_4_scaffold_254_6
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4733..5176)
DNA (444bp) protein (148aa)
Periplasmic copper-binding protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QT76_9EURY
Periplasmic copper-binding protein {ECO:0000313|EMBL:EFW91805.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pa
sw_4_scaffold_254_7
Enterococcus pallens, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5323..6228
DNA (906bp) protein (302aa)
LPXTG-domain-containing protein cell wall anchor domain n=1 Tax=Enterococcus pallens ATCC BAA-351 RepID=R2SQ80_9ENTE
LPXTG-domain-containing protein cell wall anchor domain {ECO:0000313|EMBL:EOH97395.1}; TaxID=1158607 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="E
cell wall surface anchor family protein
sw_4_scaffold_254_8
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6513..7631)
DNA (1119bp) protein (373aa)
Integrase family protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JB47_HALJB
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ADJ16500.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotga
sw_4_scaffold_254_9
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8056..9732)
DNA (1677bp) protein (559aa)
Transposase IS4 family protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LWA4_HALLT
Transposase IS4 family protein {ECO:0000313|EMBL:ACM58494.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi
transposase IS4 family protein
sw_4_scaffold_254_10
Haloferax sp. ATCC BAA-646, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9763..10563)
DNA (801bp) protein (267aa)
Putative cobalt ABC transporter ATP-binding protein n=3 Tax=Haloferax RepID=M0F839_9EURY
Putative cobalt ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ55483.1}; TaxID=1227464 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Halo
cbiO2; putative cobalt ABC transporter ATP-binding protein
sw_4_scaffold_254_11
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10551..11363)
DNA (813bp) protein (271aa)
Putative cobalt ABC transporter permease n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0J4U5_9EURY
Putative cobalt ABC transporter permease {ECO:0000313|EMBL:EMA04157.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitr
cbiQ2; putative cobalt ABC transporter permease
sw_4_scaffold_254_12
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11360..11659)
DNA (300bp) protein (100aa)
CbiM protein C-terminal domain-like protein n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0J734_9EURY
CbiM protein C-terminal domain-like protein {ECO:0000313|EMBL:EMA04158.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax den
cbiM2; CbiM protein C-terminal domain-like protein
sw_4_scaffold_254_13
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11656..12312)
DNA (657bp) protein (219aa)
Cobalamin biosynthesis protein CbiM n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0ICX8_9EURY
Cobalamin biosynthesis protein CbiM {ECO:0000313|EMBL:ELZ94606.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifont
cbiM1; Cobalamin biosynthesis protein CbiM
sw_4_scaffold_254_14
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12371..12856
DNA (486bp) protein (162aa)
Putative nickel-responsive regulator n=2 Tax=Haloferax RepID=M0GXE5_HALL2
Putative nickel-responsive regulator {ECO:0000256|HAMAP-Rule:MF_00476}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexa
CopG family transcriptional regulator
sw_4_scaffold_254_15
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13149..13523)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JA54_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ14576.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_4_scaffold_254_16
unknown

Not on your lists

comp(13539..13715)
DNA (177bp) protein (59aa)

This feature has no annotations

sw_4_scaffold_254_17
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14042..14254
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NHM5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA56155.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_4_scaffold_254_18
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14325..15248
DNA (924bp) protein (308aa)
Ribonuclease BN n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0N0F7_HALMO
Ribonuclease BN {ECO:0000313|EMBL:EMA51361.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
hypothetical protein
sw_4_scaffold_254_19
unknown

Not on your lists

15280..15468
DNA (189bp) protein (63aa)

This feature has no annotations

Displaying 19 items

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