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sw_4_scaffold_2590

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_2590_1
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1..384)
DNA (384bp) protein (128aa)
Alanine racemase n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BRE0_9EURY
Alanine racemase {ECO:0000313|EMBL:ELZ12269.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
hypothetical protein
sw_4_scaffold_2590_2
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(441..686)
DNA (246bp) protein (82aa)
NUDIX hydrolase family protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=L9VCC5_HALJB
NUDIX hydrolase family protein {ECO:0000313|EMBL:ELY33998.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus
sw_4_scaffold_2590_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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914..1627
DNA (714bp) protein (238aa)
Homolog to DNA topoisomerase I n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTB7_NATM8
homolog to DNA topoisomerase I
Homolog to DNA topoisomerase 1 {ECO:0000313|EMBL:CCQ37684.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolap
sw_4_scaffold_2590_4
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1671..2081
DNA (411bp) protein (137aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HRH3_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM58313.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain
sw_4_scaffold_2590_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2147..3250
DNA (1104bp) protein (368aa)
endA; tRNA splicing endonuclease (EC:3.1.27.9)
tRNA-splicing endonuclease {ECO:0000255|HAMAP-Rule:MF_01834}; EC=4.6.1.16 {ECO:0000255|HAMAP-Rule:MF_01834};; tRNA-intron endonuclease {ECO:0000255|HAMAP-Rule:MF_01834}; TaxID=348780 species="Archaea;
tRNA-splicing endonuclease n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=ENDA_NATPD
sw_4_scaffold_2590_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4043..5221
DNA (1179bp) protein (393aa)
trpS; tryptophan--tRNA ligase (EC:6.1.1.2)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=268739 species="Archaea;
Tryptophan--tRNA ligase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTB8_NATM8
sw_4_scaffold_2590_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5218..5604
DNA (387bp) protein (129aa)
trpS; tryptophan--tRNA ligase (EC:6.1.1.2)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=268739 species="Archaea;
Tryptophan--tRNA ligase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTB8_NATM8
sw_4_scaffold_2590_8
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5604..5861
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DIM7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ35325.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
sw_4_scaffold_2590_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5918..6826
DNA (909bp) protein (303aa)
ABC-type transport system ATP-binding protein (Probable substrate copper) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XK81_NATM8
nosF3; ABC-type transport system ATP-binding protein (probable substrate copper)
ABC-type transport system ATP-binding protein (Probable substrate copper) {ECO:0000313|EMBL:CCQ35422.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
sw_4_scaffold_2590_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6823..7674
DNA (852bp) protein (284aa)
ABC-type transport system permease protein (Probable substrate copper) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITA3_NATPD
abc25p; copper ABC transporter permease
ABC-type transport system permease protein (Probable substrate copper) {ECO:0000313|EMBL:CAI48631.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Nat
sw_4_scaffold_2590_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7987..8760
DNA (774bp) protein (258aa)
ilvA; threonine dehydratase (EC:4.3.1.19)
Threonine ammonia-lyase {ECO:0000313|EMBL:CAI48629.1}; EC=4.3.1.19 {ECO:0000313|EMBL:CAI48629.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natron
Threonine ammonia-lyase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITA5_NATPD
Displaying 11 items

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