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sw_4_scaffold_3

Search features with annotation key words

Displaying items 1-30 of 185 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_3_1

Not on your lists

2..433
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Acinetobacter venetianus RAG-1 = CIP 110063 RepID=N8YL14_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKN01834.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DNA methylase family protein
sw_4_scaffold_3_2
unknown

Not on your lists

420..593
DNA (174bp) protein (58aa)

This feature has no annotations

sw_4_scaffold_3_3

Not on your lists

590..1594
DNA (1005bp) protein (335aa)
RecB family exonuclease n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C5N3_DESTA
Uncharacterized protein {ECO:0000313|EMBL:KKN26500.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RecB family exonuclease
sw_4_scaffold_3_4
unknown

Not on your lists

comp(1626..1895)
DNA (270bp) protein (90aa)

This feature has no annotations

sw_4_scaffold_3_5
RLO_Nitrospinae_47_7, Nitrospirae, Bacteria

Not on your lists

1956..2396
DNA (441bp) protein (147aa)
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_47_7_curated
sw_4_scaffold_3_6
unknown

Not on your lists

2755..2952
DNA (198bp) protein (66aa)

This feature has no annotations

sw_4_scaffold_3_7
unknown

Not on your lists

2968..3195
DNA (228bp) protein (76aa)

This feature has no annotations

sw_4_scaffold_3_8
unknown

Not on your lists

3207..3401
DNA (195bp) protein (65aa)

This feature has no annotations

sw_4_scaffold_3_9
unknown

Not on your lists

3407..3682
DNA (276bp) protein (92aa)

This feature has no annotations

sw_4_scaffold_3_10
unknown

Not on your lists

comp(3763..3939)
DNA (177bp) protein (59aa)

This feature has no annotations

sw_4_scaffold_3_11
unknown

Not on your lists

3976..4233
DNA (258bp) protein (86aa)

This feature has no annotations

sw_4_scaffold_3_12
unknown

Not on your lists

4226..4648
DNA (423bp) protein (141aa)

This feature has no annotations

sw_4_scaffold_3_13
Atopobium sp. oral taxon 199, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4645..5466
DNA (822bp) protein (274aa)
Curved DNA-binding protein n=1 Tax=Atopobium sp. oral taxon 199 str. F0494 RepID=S2ZWG7_9ACTN
Curved DNA-binding protein {ECO:0000313|EMBL:EPD78645.1}; TaxID=1203602 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. oral taxon
dnaJ; DnaJ1 protein
sw_4_scaffold_3_14
unknown

Not on your lists

5463..5600
DNA (138bp) protein (46aa)

This feature has no annotations

sw_4_scaffold_3_15
unknown

Not on your lists

5597..5728
DNA (132bp) protein (44aa)

This feature has no annotations

sw_4_scaffold_3_16
unknown

Not on your lists

5725..5877
DNA (153bp) protein (51aa)

This feature has no annotations

sw_4_scaffold_3_17
unknown

Not on your lists

6020..6676
DNA (657bp) protein (219aa)

This feature has no annotations

sw_4_scaffold_3_18
unknown

Not on your lists

6663..7661
DNA (999bp) protein (333aa)

This feature has no annotations

sw_4_scaffold_3_19
unknown

Not on your lists

7654..7842
DNA (189bp) protein (63aa)

This feature has no annotations

sw_4_scaffold_3_20
unknown

Not on your lists

7839..8090
DNA (252bp) protein (84aa)

This feature has no annotations

sw_4_scaffold_3_21

Not on your lists

8090..8407
DNA (318bp) protein (106aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN38487.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
sw_4_scaffold_3_22
unknown

Not on your lists

8513..8995
DNA (483bp) protein (161aa)

This feature has no annotations

sw_4_scaffold_3_23
unknown

Not on your lists

9010..9381
DNA (372bp) protein (124aa)

This feature has no annotations

sw_4_scaffold_3_24
unknown

Not on your lists

9378..10292
DNA (915bp) protein (305aa)

This feature has no annotations

sw_4_scaffold_3_25
Candidatus Pelagibacter ubique, Candidatus Pelagibacter, Pelagibacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10382..15499
DNA (5118bp) protein (1706aa)
Uncharacterized protein n=1 Tax=Pelagibacter ubique (strain HTCC1062) RepID=Q4FM44_PELUB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAS84402.1}; Flags: Fragment;; TaxID=314261 species="Bacteria; Proteobacteria; Alphaproteobacteria; Pelagibacterales; Pelagibacteraceae; Candidatus Pelagibact
sw_4_scaffold_3_26

Not on your lists

15513..17645
DNA (2133bp) protein (711aa)
Uncharacterized protein n=1 Tax=Ruegeria sp. (strain TM1040) RepID=Q1GIG2_RUEST
Uncharacterized protein {ECO:0000313|EMBL:KKL67946.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
sw_4_scaffold_3_27
Cenarchaeum symbiosum, Cenarchaeum, Cenarchaeales, Thaumarchaeota, Archaea

Not on your lists

17705..22495
DNA (4791bp) protein (1597aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI00037410AE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK77141.1}; TaxID=414004 species="Archaea; Thaumarchaeota; Cenarchaeales; Cenarchaeaceae; Cenarchaeum.;" source="Cenarchaeum symbiosum (strain A).;"
sw_4_scaffold_3_28

Not on your lists

22705..24963
DNA (2259bp) protein (753aa)
Phage-related tail fiber protein n=1 Tax=uncultured Mediterranean phage MEDS2 group RepID=K7YBB0_9VIRU
Phage-related tail fiber protein {ECO:0000313|EMBL:AFX83854.1}; TaxID=1262073 species="Viruses; environmental samples.;" source="uncultured Mediterranean phage MEDS2 group.;"
prophage MuMc02, head decoration protein
sw_4_scaffold_3_29
R_OD1_Nomurabacteria_39_18, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

25060..29964
DNA (4905bp) protein (1635aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI00037410AE
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_39_18_curated
hypothetical protein
sw_4_scaffold_3_30
R_OD1_Kaiserbacteria_53_29, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

30024..32138
DNA (2115bp) protein (705aa)
Uncharacterized protein n=1 Tax=Pelagibacter ubique (strain HTCC1062) RepID=Q4FM44_PELUB
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Kaiserbacteria_53_29_curated
hypothetical protein
Displaying items 1-30 of 185 in total

View Taxonomy