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sw_4_scaffold_316

Search features with annotation key words

Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_316_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3..626)
DNA (624bp) protein (208aa)
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:KCZ71060.1}; EC=2.1.1.72 {ECO:0000313|EMBL:KCZ71060.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrob
hsdM-2; type I restriction modification system, methyltransferase subunit (EC:2.1.1.72)
Type I restriction modification system,methyltransferase subunit n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W4T9_UNCMA
sw_4_scaffold_316_2
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(1229..1678)
DNA (450bp) protein (150aa)
Putative nucleic acid-binding protein, contains PIN domain n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AKT2_FLELS
nucleic acid-binding protein, contains PIN domain Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
nucleic acid-binding protein, contains PIN domain
sw_4_scaffold_316_3
CG_Wirth_01, Wirthbacteria, Bacteria

Not on your lists

comp(1724..2533)
DNA (810bp) protein (270aa)
Putative uncharacterized protein Tax=CG_Wirth_01
Putative uncharacterized protein id=4357633 bin=GWF2_Lentisphaerae_50_93 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
sw_4_scaffold_316_4
unknown

Not on your lists

2557..2904
DNA (348bp) protein (116aa)

This feature has no annotations

sw_4_scaffold_316_5
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

Not on your lists

3157..3576
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G4Y4_CHLAD
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
hypothetical protein
sw_4_scaffold_316_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3618..3956
DNA (339bp) protein (113aa)
Insertion element protein n=1 Tax=Pseudanabaena biceps PCC 7429 RepID=L8N8L3_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:ETW92146.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
sw_4_scaffold_316_7
Chromohalobacter salexigens, Chromohalobacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3927..5183)
DNA (1257bp) protein (419aa)
Restriction modification system DNA specificity protein n=1 Tax=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) RepID=Q1R1F8_CHRSD
restriction modification system DNA specificity protein
Restriction modification system DNA specificity protein {ECO:0000313|EMBL:ABE57450.1}; TaxID=290398 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Chromohal
sw_4_scaffold_316_8
Methanosarcina sp. 2.H.A.1B.4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5229..5534)
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B5B5C6
Uncharacterized protein {ECO:0000313|EMBL:KKG12538.1}; TaxID=1483600 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina s
hypothetical protein
sw_4_scaffold_316_9
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5576..5872)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B4F1DF
DNA polymerase beta domain-containing protein
DNA polymerase beta domain protein region {ECO:0000313|EMBL:ACL46105.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (stra
sw_4_scaffold_316_10
R_Planctomycetes_50_16, Planctomycetes, Bacteria

Not on your lists

comp(5910..8690)
DNA (2781bp) protein (927aa)
type I site-specific deoxyribonuclease; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
hsdR-2; type I restriction modification system, restriction subunit (EC:3.1.21.3)
Type I restriction modification system,restriction subunit n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W4T5_UNCMA
sw_4_scaffold_316_11
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8912..9715
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Hymenobacter aerophilus RepID=UPI00036D84C9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL04209.1}; TaxID=439235 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source="Desulfat
sw_4_scaffold_316_12
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9663..10184)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S1B8_THEOJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL07195.1}; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermosedimini
sw_4_scaffold_316_trna_1
unknown

Not on your lists

comp(10709..10788)
DNA (80bp)
transferRNA
sw_4_scaffold_316_13
unknown

Not on your lists

comp(10967..11179)
DNA (213bp) protein (71aa)

This feature has no annotations

sw_4_scaffold_316_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11378..13972)
DNA (2595bp) protein (865aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=309807 species="Bacteria; Bacte
DNA mismatch repair protein MutS n=1 Tax=Salisaeta longa RepID=UPI0003B47256
MutS2 family protein
sw_4_scaffold_316_15
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(14142..14735)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAG8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40227.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
sw_4_scaffold_316_16
unknown

Not on your lists

comp(14835..15092)
DNA (258bp) protein (86aa)

This feature has no annotations

sw_4_scaffold_316_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15156..16154)
DNA (999bp) protein (333aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:CBH23745.1}; EC=2.7.7.24 {ECO:0000313|EMBL:CBH23745.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sed
glucose-1-phosphate thymidylyltransferase n=1 Tax=Salisaeta longa RepID=UPI0003B30F14
strD; glucose-1-phosphate thymidylyltransferase
sw_4_scaffold_316_18
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16663..17382
DNA (720bp) protein (240aa)
OmpA/MotB domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG70_RHOM4
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:ACY47626.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mar
sw_4_scaffold_316_19
unknown

Not on your lists

17617..18402
DNA (786bp) protein (262aa)

This feature has no annotations

sw_4_scaffold_316_20
unknown

Not on your lists

comp(18523..18690)
DNA (168bp) protein (56aa)

This feature has no annotations

sw_4_scaffold_316_21
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19009..20829
DNA (1821bp) protein (607aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B50F89
Uncharacterized protein {ECO:0000313|EMBL:ELR70278.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
hypothetical protein
sw_4_scaffold_316_22
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21022..22194
DNA (1173bp) protein (391aa)
Phospholipase D, putative n=1 Tax=Acanthamoeba castellanii str. Neff RepID=L8GD73_ACACA
phospholipase D, putative Tax=RBG_16_Deltaproteobacteria_71_12_curated
phospholipase family protein
sw_4_scaffold_316_23
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(22240..23289)
DNA (1050bp) protein (350aa)
sodium:calcium antiporter n=1 Tax=Salisaeta longa RepID=UPI0003B6F90D
Ca2+/Na+ antiporter
Ca2+/Na+ antiporter {ECO:0000313|EMBL:AFY56719.1}; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
sw_4_scaffold_316_24

Not on your lists

comp(23378..23758)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZPG7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKN30301.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
sw_4_scaffold_316_25
unknown

Not on your lists

comp(24610..24714)
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying 26 items

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