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sw_4_scaffold_340

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_340_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..3222)
DNA (3222bp) protein (1074aa)
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas
DNA polymerase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISP1_NATPD
polB1; family B DNA-directed DNA polymerase
sw_4_scaffold_340_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3372..3557
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISP0_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48846.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_4_scaffold_340_3
Halovirus HCTV-5, Viruses

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comp(3856..4467)
DNA (612bp) protein (204aa)
HNH protein n=1 Tax=Halovirus HCTV-5 RepID=R4T7H6_9VIRU
HNH protein {ECO:0000313|EMBL:AGM11719.1}; TaxID=1273748 species="Viruses; dsDNA viruses, no RNA stage; unclassified dsDNA viruses; unclassified archaeal dsDNA viruses; Haloviruses.;" source="Haloviru
sw_4_scaffold_340_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5353..5679
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISN9_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48847.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_4_scaffold_340_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5676..6092
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPC6_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35893.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_4_scaffold_340_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6093..6533)
DNA (441bp) protein (147aa)
DNA double-strand break repair Rad50 ATPase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISN7_NATPD
rad50; chromosome segregation protein
DNA double-strand break repair Rad50 ATPase {ECO:0000256|HAMAP-Rule:MF_00449}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Na
sw_4_scaffold_340_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6527..8665)
DNA (2139bp) protein (713aa)
DNA double-strand break repair Rad50 ATPase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKH3_NATM8
rad50; DNA double-strand break repair ATPase Rad50
DNA double-strand break repair Rad50 ATPase {ECO:0000256|HAMAP-Rule:MF_00449}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Na
sw_4_scaffold_340_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8662..10026)
DNA (1365bp) protein (455aa)
DNA double-strand break repair protein Mre11 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPE2_NATM8
mre11; DNA double-strand break repair protein Mre11
DNA double-strand break repair protein Mre11 {ECO:0000313|EMBL:CCQ35895.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natro
sw_4_scaffold_340_9

Not on your lists

10626..11027
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y1J7_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS08538.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
hypothetical protein
sw_4_scaffold_340_10
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11002..12570)
DNA (1569bp) protein (523aa)
Xanthine/uracil permease family protein n=2 Tax=Haloarcula hispanica RepID=G0HVJ8_HALHT
xanthine permease
Xanthine permease {ECO:0000313|EMBL:AHB66381.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;"
sw_4_scaffold_340_11
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12823..13929)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JRM6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA10649.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
hypothetical protein
sw_4_scaffold_340_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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14260..14847
DNA (588bp) protein (196aa)
short chain dehydrogenase/reductase (EC:1.1.1.-) id=24645357 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Dehydrogenase {ECO:0000313|EMBL:ERH09575.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
fabG2; 3-oxoacyl-ACP reductase
sw_4_scaffold_340_13

Not on your lists

14980..15282
DNA (303bp) protein (101aa)
Molecular chaperone, small heat shock protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4X6W1_9ARCH
Molecular chaperone, small heat shock protein {ECO:0000313|EMBL:ESS03399.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
sw_4_scaffold_340_14

Not on your lists

15546..16283
DNA (738bp) protein (246aa)
Molecular chaperone, small heat shock protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4X6W1_9ARCH
Molecular chaperone, small heat shock protein {ECO:0000313|EMBL:ESS03399.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
sw_4_scaffold_340_15
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16302..18062)
DNA (1761bp) protein (587aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZI20_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60350.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
Alkaline phosphatase
sw_4_scaffold_340_16
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18752..20812
DNA (2061bp) protein (687aa)
UvrD/REP helicase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NRU9_HALBP
UvrD/REP helicase {ECO:0000313|EMBL:ADQ66886.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense (stra
UvrD/REP helicase
sw_4_scaffold_340_17
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20809..21714
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NRU8_HALBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ66885.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
sw_4_scaffold_340_18
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21711..25160
DNA (3450bp) protein (1150aa)
UvrD/REP helicase n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VRU6_9EURY
UvrD/REP helicase {ECO:0000313|EMBL:ELY39884.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;"
ATP-dependent exonuclase v subunit beta
sw_4_scaffold_340_19
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25208..25522
DNA (315bp) protein (105aa)
Major facilitator superfamily transporter n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XME4_9EURY
Major facilitator superfamily transporter {ECO:0000313|EMBL:ELY61838.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcu
major facilitator superfamily MFS_1
sw_4_scaffold_340_trna_1
unknown

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comp(25751..25825)
DNA (75bp)
transferRNA
sw_4_scaffold_340_20
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25916..26806
DNA (891bp) protein (297aa)
ubiA2; (S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase (EC:2.5.1.42)
Digeranylgeranylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01286}; Short=DGGGP synthase {ECO:0000256|HAMAP-Rule:MF_01286};; Short=DGGGPS {ECO:0000256|HAMAP-Rule:MF_01286};; EC=2.5.1.42 {EC
Digeranylgeranylglyceryl phosphate synthase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XS14_NATM8
sw_4_scaffold_340_21
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26861..27268
DNA (408bp) protein (136aa)
YneT family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XL53_NATM8
YneT family protein
YneT family protein {ECO:0000313|EMBL:CCQ37104.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (stra
sw_4_scaffold_340_22
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27269..27559)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INH5_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50328.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
Displaying 23 items

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