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sw_4_scaffold_397

Search features with annotation key words

Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_397_1
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..761)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DX59_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK40446.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
sw_4_scaffold_397_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

898..1200
DNA (303bp) protein (101aa)
nadA; quinolinate synthetase (EC:4.1.99.-)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00569}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00569};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Quinolinate synthase A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRE3_NATPD
sw_4_scaffold_397_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1205..2947
DNA (1743bp) protein (581aa)
nadB; L-aspartate oxidase, quinolinate synthetase subunit B (EC:1.4.3.16)
L-aspartate oxidase {ECO:0000313|EMBL:CAI49299.1}; EC=1.4.3.16 {ECO:0000313|EMBL:CAI49299.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomon
L-aspartate oxidase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRE4_NATPD
sw_4_scaffold_397_4
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2944..3423
DNA (480bp) protein (160aa)
nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase [carboxylating] {ECO:0000256|PIRNR:PIRNR006250}; EC=2.4.2.19 {ECO:0000256|PIRNR:PIRNR006250};; Quinolinate phosphoribosyltransferase [decarboxylating] {ECO:0000
Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=2 Tax=Halobacterium salinarum RepID=B0R6K5_HALS3
sw_4_scaffold_397_5
unknown

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comp(3434..3673)
DNA (240bp) protein (80aa)

This feature has no annotations

sw_4_scaffold_397_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3723..4175)
DNA (453bp) protein (151aa)
gpmI; phosphoglycerate mutase,2,3-biphosphateglycerate-independent type (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQK1_NATM8
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HA
sw_4_scaffold_397_7
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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4231..5250
DNA (1020bp) protein (340aa)
hypothetical protein
30S ribosomal protein S6e; K02991 small subunit ribosomal protein S6e id=24654505 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Tax=RBG_16_RIF_CHLX_69_14_curated
sw_4_scaffold_397_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5488..5931
DNA (444bp) protein (148aa)
FxsA domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IS18_NATPD
fxsA; FxsA
FxsA domain protein {ECO:0000313|EMBL:CAI49072.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_4_scaffold_397_9
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6158..7180)
DNA (1023bp) protein (341aa)
adh; alcohol dehydrogenase (EC:1.1.1.1)
Oxidoreductase (Homolog to zinc-containing alcohol dehydrogenase) {ECO:0000313|EMBL:CAJ52487.3}; EC=1.1.1.- {ECO:0000313|EMBL:CAJ52487.3};; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria;
alcohol dehydrogenase n=1 Tax=Halorubrum sp. T3 RepID=UPI0003812D14
sw_4_scaffold_397_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7259..7597)
DNA (339bp) protein (113aa)
CBS domain protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y0Z6_NATM8
cbs6; CBS domain protein
CBS domain protein {ECO:0000313|EMBL:CCQ36159.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (strai
sw_4_scaffold_397_11
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7735..8148)
DNA (414bp) protein (138aa)
msrB1; peptide methionine sulfoxide reductase (R-form specific) (EC:1.8.4.11); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] id=24617941 bin=Halonotius_J07HN4 species=unknown genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
msrB1; peptide methionine sulfoxide reductase MsrB (R-form specific) (EC:1.8.4.12)
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:ERH05550.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.
sw_4_scaffold_397_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8238..8642)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNA6_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35370.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_4_scaffold_397_13
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8741..8917
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQW2_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36561.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_4_scaffold_397_14

Not on your lists

8975..9229
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MGS0_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN06461.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_4_scaffold_397_15
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9231..10274)
DNA (1044bp) protein (348aa)
Siroheme decarboxylase AhbA n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQH3_NATPD
ahbA, nirDL; siroheme decarboxylase AhbA
Siroheme decarboxylase AhbA {ECO:0000313|EMBL:CCQ36563.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapens
sw_4_scaffold_397_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10638..11702
DNA (1065bp) protein (355aa)
trpD_3; anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Probable phosphoribosyltransferase (Homolog to anthranilate phosphoribosyltransferase) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQH4_NATPD
Probable phosphoribosyltransferase (Homolog to anthranilate phosphoribosyltransferase) {ECO:0000313|EMBL:CAI49622.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halob
sw_4_scaffold_397_17
unknown

Not on your lists

comp(11713..12882)
DNA (1170bp) protein (390aa)

This feature has no annotations

sw_4_scaffold_397_18

Not on your lists

comp(12983..14308)
DNA (1326bp) protein (442aa)
penicillin G acylase (EC:3.5.1.11)
Uncharacterized protein n=1 Tax=Acinetobacter sp. NIPH 1867 RepID=N9SJR1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKN42040.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
sw_4_scaffold_397_19
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14337..15350)
DNA (1014bp) protein (338aa)
NUDIX family hydrolase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKV3_NATM8
nudF2; NUDIX family hydrolase
NUDIX family hydrolase {ECO:0000313|EMBL:CCQ36568.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (s
sw_4_scaffold_397_20
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15396..15740)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HLN9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP88814.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_4_scaffold_397_trna_1
unknown

Not on your lists

comp(16048..16120)
DNA (73bp)
transferRNA
sw_4_scaffold_397_21
unknown

Not on your lists

16287..16577
DNA (291bp) protein (97aa)

This feature has no annotations

sw_4_scaffold_397_22
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16598..16858
DNA (261bp) protein (87aa)
AbrB family transcription regulator n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0DYH4_9EURY
AbrB family transcription regulator {ECO:0000313|EMBL:ELZ40585.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californ
AbrB family transcription regulator
sw_4_scaffold_397_23
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16860..17267
DNA (408bp) protein (136aa)
Uncharacterized protein n=3 Tax=Halorubrum RepID=M0DQP3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ45763.1}; TaxID=1227467 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum JCM 9100
hypothetical protein
sw_4_scaffold_397_24
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17431..18024)
DNA (594bp) protein (198aa)
tRNA (pseudouridine(54)-N(1))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00587}; EC=2.1.1.257 {ECO:0000256|HAMAP-Rule:MF_00587};; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Halofer
tRNA (pseudouridine(54)-N(1))-methyltransferase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DFQ9_9EURY
hypothetical protein
sw_4_scaffold_397_25
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18266..19390)
DNA (1125bp) protein (375aa)
gth7; probable glycosyltransferase, type 1 (EC:2.4.-.-)
Probable glycosyltransferase, type 1 {ECO:0000313|EMBL:CCC40826.1}; EC=2.4.-.- {ECO:0000313|EMBL:CCC40826.1};; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae
Probable glycosyltransferase, type 1 n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LLM0_HALWC
sw_4_scaffold_397_26
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19658..20629)
DNA (972bp) protein (324aa)
hypothetical protein id=24631109 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
Uncharacterized protein {ECO:0000313|EMBL:ERG94882.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
sw_4_scaffold_397_27
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20753..21763
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9VY28_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY42085.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidifaciens J
methicillin resistance protein
sw_4_scaffold_397_28
Bacillus vireti, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21782..22789)
DNA (1008bp) protein (336aa)
UPI0003D5EBBD related cluster n=1 Tax=unknown RepID=UPI0003D5EBBD
Uncharacterized protein {ECO:0000313|EMBL:ETI67551.1}; TaxID=1131730 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus vireti LMG 21834.;"
sw_4_scaffold_397_29
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24000..24386
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DMN8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ36063.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 11
hypothetical protein
Displaying items 1-30 of 33 in total

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