ggKbase home page

sw_4_scaffold_411

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_411_1
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3..275
DNA (273bp) protein (91aa)
Nitroreductase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LB71_9EURY
Nitroreductase {ECO:0000313|EMBL:EMA30812.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
sw_4_scaffold_411_2
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(277..462)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0HCK9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ81513.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
sw_4_scaffold_411_3
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1297..1683
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0AAS6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY95860.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.;"
sw_4_scaffold_411_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1898..2872
DNA (975bp) protein (325aa)
Sirohydrochlorin cobaltochelatase {ECO:0000313|EMBL:CAI48885.1}; EC=4.99.1.3 {ECO:0000313|EMBL:CAI48885.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriace
Sirohydrochlorin cobaltochelatase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISK1_NATPD
hypothetical protein
sw_4_scaffold_411_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3386..3892
DNA (507bp) protein (169aa)
hypothetical protein NP1590A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=UPI00005B8BD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48886.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_4_scaffold_411_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3889..4485)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XS90_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37205.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_4_scaffold_411_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4537..4716)
DNA (180bp) protein (60aa)
UPF0434 protein Nmlp_3063 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y3V1_NATM8
UPF0434 family protein
UPF0434 protein Nmlp_3063 {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolape
sw_4_scaffold_411_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4763..5227
DNA (465bp) protein (155aa)
DUF123 domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQY0_NATPD
hypothetical protein
DUF123 domain protein {ECO:0000313|EMBL:CAI49464.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (stra
sw_4_scaffold_411_9
Chondrus crispus, Chondrus, Gigartinales, Florideophyceae, Eukaryota

Not on your lists

comp(5238..7034)
DNA (1797bp) protein (599aa)
Putative AAA ATPase containing von Willebrand factor type A (VWA)domain (Fragment) n=1 Tax=Chondrus crispus RepID=R7QV71_CHOCR
Putative AAA ATPase containing von Willebrand factor type A (VWA)domain {ECO:0000313|EMBL:CDF41366.1}; Flags: Fragment;; TaxID=2769 species="Eukaryota; Rhodophyta; Florideophyceae; Gigartinales; Gigar
thrombospondin type 3 repeat family protein
sw_4_scaffold_411_10
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7092..7982)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JHH5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60986.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_4_scaffold_411_11
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8097..8576)
DNA (480bp) protein (160aa)
cyclase/dehydrase id=24615349 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Cyclase/dehydrase {ECO:0000313|EMBL:ESP87240.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum ty
hypothetical protein
sw_4_scaffold_411_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8631..9056)
DNA (426bp) protein (142aa)
Lrp/AsnC family transcription regulator n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XS92_NATM8
Lrp/AsnC family transcription regulator
Lrp/AsnC family transcription regulator {ECO:0000313|EMBL:CCQ37210.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomon
sw_4_scaffold_411_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9229..11238
DNA (2010bp) protein (670aa)
hbd_2; 3-hydroxyacyl-CoA dehydrogenase 2/enoyl-CoA hydratase I 2 (EC:1.1.1.35 4.2.1.17)
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase {ECO:0000313|EMBL:CAI49468.1}; EC=1.1.1.35 {ECO:0000313|EMBL:CAI49468.1};; EC=4.2.1.17 {ECO:0000313|EMBL:CAI49468.1};; TaxID=348780 species="Archa
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQX6_NATPD
sw_4_scaffold_411_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11235..11696
DNA (462bp) protein (154aa)
fadB_2; enoyl-CoA hydratase II 2 (EC:4.2.1.17)
MaoC family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQX4_NATPD
MaoC domain protein {ECO:0000313|EMBL:CAI49470.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_4_scaffold_411_15
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11956..13170
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LPB5_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA34943.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_4_scaffold_411_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13177..13530)
DNA (354bp) protein (118aa)
Probable transcription factor (Homolog to RNA polymerase III subunit RPC34) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQX2_NATPD
hypothetical protein
Probable transcription factor (Homolog to RNA polymerase III subunit RPC34) {ECO:0000313|EMBL:CAI49472.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
sw_4_scaffold_411_17
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13792..14847
DNA (1056bp) protein (352aa)
Transposase, IS605 OrfB family protein n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0NRB8_9EURY
Transposase, IS605 OrfB family protein {ECO:0000313|EMBL:EMA60138.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litor
transposase, IS605 OrfB family, central region
sw_4_scaffold_411_18
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15547..17001)
DNA (1455bp) protein (485aa)
menE, acs6; O-succinylbenzoic acid--CoA ligase (EC:6.2.1.26)
O-succinylbenzoate--CoA ligase {ECO:0000313|EMBL:CCQ37213.1}; EC=6.2.1.26 {ECO:0000313|EMBL:CCQ37213.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
O-succinylbenzoic acid--CoA ligase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XS91_NATM8
Displaying 18 items

View Taxonomy