ggKbase home page

sw_4_scaffold_4485

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_4485_1
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3..131
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0DN79_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ36935.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.
hypothetical protein
sw_4_scaffold_4485_2
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

135..500
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IJH1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG05535.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
sw_4_scaffold_4485_3
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

575..970
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V769_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK20777.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain AT
sw_4_scaffold_4485_4
unknown

Not on your lists

1341..1517
DNA (177bp) protein (59aa)

This feature has no annotations

sw_4_scaffold_4485_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1537..2172)
DNA (636bp) protein (212aa)
IS240-type transposase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKD8_NATM8
IS240-type transposase
ISH14-type transposase ISNamo10 {ECO:0000313|EMBL:CCQ35713.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moola
sw_4_scaffold_4485_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2265..2771)
DNA (507bp) protein (169aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYQ2_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ELZ27542.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex
short-chain dehydrogenase
sw_4_scaffold_4485_7
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2761..3003)
DNA (243bp) protein (81aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MAB8_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EMA41549.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
short-chain dehydrogenase/reductase SDR
sw_4_scaffold_4485_8
unknown

Not on your lists

3124..3489
DNA (366bp) protein (122aa)

This feature has no annotations

sw_4_scaffold_4485_9
unknown

Not on your lists

3512..3673
DNA (162bp) protein (54aa)

This feature has no annotations

sw_4_scaffold_4485_10

Not on your lists

comp(3635..4408)
DNA (774bp) protein (258aa)
Dehydrogenase n=1 Tax=uncultured archaeon A07HR60 RepID=V4XPZ6_9ARCH
Dehydrogenase {ECO:0000313|EMBL:ESS10579.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
short-chain dehydrogenase/reductase SDR
sw_4_scaffold_4485_11

Not on your lists

comp(4704..5114)
DNA (411bp) protein (137aa)
3-dehydroquinate dehydratase n=1 Tax=uncultured archaeon A07HR60 RepID=V4YH03_9ARCH
3-dehydroquinate dehydratase {ECO:0000313|EMBL:ESS10577.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
sw_4_scaffold_4485_12

Not on your lists

comp(5203..5529)
DNA (327bp) protein (109aa)
3-dehydroquinate dehydratase n=1 Tax=uncultured archaeon A07HR60 RepID=V4YH03_9ARCH
3-dehydroquinate dehydratase {ECO:0000313|EMBL:ESS10577.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
sw_4_scaffold_4485_13
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5737..6636
DNA (900bp) protein (300aa)
Transposase family protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NFE7_9EURY
Transposase family protein {ECO:0000313|EMBL:EMA56697.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis
IS4-like transposase
sw_4_scaffold_4485_14
unknown

Not on your lists

comp(6633..6713)
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 14 items

View Taxonomy