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sw_4_scaffold_4579

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_4579_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(31..153)
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IN44_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50461.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_4_scaffold_4579_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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306..1325
DNA (1020bp) protein (340aa)
NADPH dehydrogenase (OLD yellow enzyme); 2,4-dienoyl-CoA reductase (NADPH) (EC:1.3.1.34 1.6.99.1)
NamA family oxidoreductase (Homolog to old yellow enzyme) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMF4_NATPD
NamA family oxidoreductase {ECO:0000313|EMBL:CAI50704.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis
sw_4_scaffold_4579_3
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1335..1790)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9YZC2_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY79580.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
sw_4_scaffold_4579_4
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1790..2044)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Halonotius sp. J07HN6 RepID=U1NZK5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH02979.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
hypothetical protein
sw_4_scaffold_4579_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2114..2524)
DNA (411bp) protein (137aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:CAI50703.2}; EC=3.1.1.29 {ECO:0000313|EMBL:CAI50703.2};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natron
Peptidyl-tRNA hydrolase n=2 Tax=Natronomonas pharaonis RepID=Q3IMF5_NATPD
sw_4_scaffold_4579_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2892..3044
DNA (153bp) protein (51aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Probable deoxycytidine triphosphate deaminase {ECO:0000255|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000255|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000255|HAMAP-Rule:MF_00146};; TaxID=348780 s
Probable deoxycytidine triphosphate deaminase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=DCD_NATPD
sw_4_scaffold_4579_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3041..3937
DNA (897bp) protein (299aa)
HTH domain protein / thiamine-phosphate synthase {ECO:0000313|EMBL:CAI50675.1}; EC=2.5.1.3 {ECO:0000313|EMBL:CAI50675.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
HTH domain protein / thiamine-phosphate synthase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMI3_NATPD
hypothetical protein
sw_4_scaffold_4579_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3934..4440
DNA (507bp) protein (169aa)
S-adenosylmethionine-dependent methyltransferase 3 (EC:2.1.1.-)
Probable S-adenosylmethionine-dependent methyltransferase {ECO:0000313|EMBL:CAI50676.1}; EC=2.1.1.- {ECO:0000313|EMBL:CAI50676.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobact
Probable S-adenosylmethionine-dependent methyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMI2_NATPD
sw_4_scaffold_4579_9
unknown

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4471..4863
DNA (393bp) protein (131aa)

This feature has no annotations

sw_4_scaffold_4579_10
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4972..6249)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NPE9_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ26211.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
sw_4_scaffold_4579_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6317..6556)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMI1_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50677.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_4_scaffold_4579_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7847..8398)
DNA (552bp) protein (184aa)
Putative ribose 1,5-bisphosphate isomerase {ECO:0000255|HAMAP-Rule:MF_00304}; EC=5.3.1.29 {ECO:0000255|HAMAP-Rule:MF_00304};; Ribulose 1,5-bisphosphate synthase {ECO:0000255|HAMAP-Rule:MF_00304}; Shor
Putative ribose 1,5-bisphosphate isomerase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RUBPS_NATPD
thi1; ribulose-1,5-biphosphate synthetase
Displaying 12 items

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