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sw_4_scaffold_4778

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_4778_1
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1..357)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI00036320C9
CTP/GMP synthase operon protein {ECO:0000313|EMBL:EMA67909.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM
CTP/GMP synthase operon protein
sw_4_scaffold_4778_2
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(365..1282)
DNA (918bp) protein (306aa)
GMP synthase [glutamine-hydrolyzing] subunit B {ECO:0000256|HAMAP-Rule:MF_00345}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00345, ECO:0000313|EMBL:ELY82817.1};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_
GMP synthase subunit B (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] subunit B n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9ZB28_9EURY
sw_4_scaffold_4778_3
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1322..2683)
DNA (1362bp) protein (454aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000313|EMBL:ELZ44211.1};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0E8S0_9EURY
sw_4_scaffold_4778_4
unknown

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3128..3250
DNA (123bp) protein (41aa)

This feature has no annotations

sw_4_scaffold_4778_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3407..4033)
DNA (627bp) protein (209aa)
Hydrolase of the alpha/beta superfamily-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MU96_9EURY
Hydrolase of the alpha/beta superfamily-like protein {ECO:0000313|EMBL:EMA49196.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source
putative hydrolase of the alpha/beta superfamily
sw_4_scaffold_4778_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4087..4881
DNA (795bp) protein (265aa)
Phage shock protein A, PspA n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6M0_9EURY
Phage shock protein A, PspA {ECO:0000313|EMBL:EMA41462.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis
pspA1; PspA domain protein
sw_4_scaffold_4778_7
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4928..5326)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JFI6_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA06769.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_4_scaffold_4778_8
unknown

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comp(5550..5837)
DNA (288bp) protein (96aa)

This feature has no annotations

sw_4_scaffold_4778_9
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6049..6660)
DNA (612bp) protein (204aa)
Flavoprotein/beta-lactamase domain-containing protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KYA5_9EURY
Flavoprotein/beta-lactamase domain-containing protein {ECO:0000313|EMBL:EMA25843.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" sourc
metallo-beta-lactamase
sw_4_scaffold_4778_10
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6781..6951
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IDJ3_9EURY
death domain-associated protein
Death domain-associated protein {ECO:0000313|EMBL:ELZ72778.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense DSM
sw_4_scaffold_4778_11
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6976..7551
DNA (576bp) protein (192aa)
UPF0215 protein C485_08372 n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZMY9_9EURY
UPF0215 protein ZOD2009_02195 {ECO:0000256|HAMAP-Rule:MF_00582}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pau
hypothetical protein
sw_4_scaffold_4778_12
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7575..8177
DNA (603bp) protein (201aa)
Uracil-DNA glycosylase, family 4 n=1 Tax=Halogranum salarium B-1 RepID=J3EX00_9EURY
Uracil-DNA glycosylase, family 4 {ECO:0000313|EMBL:EJN59537.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
phage SPO1 DNA polymerase-like protein
sw_4_scaffold_4778_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8236..8799
DNA (564bp) protein (188aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0ND83_9EURY
hisH; imidazole glycerol phosphate synthase subunit HisH
Displaying 13 items

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