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sw_4_scaffold_489

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_489_1
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..1622
DNA (1620bp) protein (540aa)
Conjugation protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IJJ9_9EURY
Conjugal transfer protein {ECO:0000313|EMBL:AHG05557.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;
conjugation protein
sw_4_scaffold_489_2
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1747..2022
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JMR8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA09638.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
hypothetical protein
sw_4_scaffold_489_3
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2019..2420
DNA (402bp) protein (134aa)
PilT protein domain-containing protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P9H9_9EURY
PilT protein domain-containing protein {ECO:0000313|EMBL:EMA66224.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocur
hypothetical protein
sw_4_scaffold_489_4
unknown

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comp(2955..3158)
DNA (204bp) protein (68aa)

This feature has no annotations

sw_4_scaffold_489_5
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3158..3655)
DNA (498bp) protein (166aa)
PilT protein domain protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WZ51_9EURY
PilT protein domain protein {ECO:0000313|EMBL:ELY53623.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innerm
hypothetical protein
sw_4_scaffold_489_6
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3652..4035)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0K3G2_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB39807.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_4_scaffold_489_7
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4507..4887)
DNA (381bp) protein (127aa)
Endoribonuclease L-PSP n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KDR4_9EURY
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:AJF27704.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_4_scaffold_489_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5009..6922)
DNA (1914bp) protein (638aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SHS2_9EURY
Glycine betaine transporter BetL {ECO:0000313|EMBL:EMA52695.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifod
glycine/betaine ABC transporter
sw_4_scaffold_489_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7028..8317
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SP67_9EURY
Potassium channel-like protein {ECO:0000313|EMBL:EMA52696.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
Kef-type K+ ransport system NAD-binding protein
sw_4_scaffold_489_10
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8471..8929
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SPX9_9EURY
Universal stress protein {ECO:0000313|EMBL:EMA27767.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 61
universal stress protein
sw_4_scaffold_489_11

Not on your lists

comp(8957..9130)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y7A4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS06937.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
sw_4_scaffold_489_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9858..10448
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SHS6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52699.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_489_13
unknown

Not on your lists

10498..10722
DNA (225bp) protein (75aa)

This feature has no annotations

sw_4_scaffold_489_14
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11049..11861)
DNA (813bp) protein (271aa)
Choline/carnitine/betaine transport n=1 Tax=Haloquadratum sp. J07HQX50 RepID=U1PWL4_9EURY
Choline/carnitine/betaine transport {ECO:0000313|EMBL:ERG98297.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum sp
betL2; glycine betaine transporter
Displaying 14 items

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