ggKbase home page

sw_4_scaffold_524

Search features with annotation key words

Displaying items 1-30 of 31 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_524_1
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3..1298)
DNA (1296bp) protein (432aa)
Transporter, solute:sodium symporter (SSS) family protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VCQ1_9BACT
Transporter, solute:sodium symporter (SSS) family protein {ECO:0000313|EMBL:EPR67342.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" s
Na+/solute symporter
sw_4_scaffold_524_2
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1464..1772)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J7Y2_CYCMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEL28651.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (str
sw_4_scaffold_524_3
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

comp(1814..3037)
DNA (1224bp) protein (408aa)
oxidoreductase n=1 Tax=Segetibacter koreensis RepID=UPI000370FDF1
oxidoreductase domain-containing protein Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
oxidoreductase domain-containing protein
sw_4_scaffold_524_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(3189..3638)
DNA (450bp) protein (150aa)
cupin n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B68CF8
cupin
Cupin 2, conserved barrel domain protein {ECO:0000313|EMBL:ABJ88036.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="S
sw_4_scaffold_524_5
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(3800..4606)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I307_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL99644.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
sw_4_scaffold_524_6
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4801..5301)
DNA (501bp) protein (167aa)
Putative uncharacterized protein id=3702896 bin=GWF2_Bacteroidetes_42_66 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
sw_4_scaffold_524_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5283..8291)
DNA (3009bp) protein (1003aa)
Cytochrome c oxidase polypeptide II n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZSS2_9BACT
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:AHG93485.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
sw_4_scaffold_524_8
unknown

Not on your lists

comp(8273..8446)
DNA (174bp) protein (58aa)

This feature has no annotations

sw_4_scaffold_524_9
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8519..8746)
DNA (228bp) protein (76aa)
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
sw_4_scaffold_524_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8840..12007)
DNA (3168bp) protein (1056aa)
Tetratricopeptide TPR_4 n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFD5_RHOMR
hypothetical protein
Tetratricopeptide TPR_4 {ECO:0000313|EMBL:AEN73950.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
sw_4_scaffold_524_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12112..13557)
DNA (1446bp) protein (482aa)
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; R
pyruvate kinase n=1 Tax=Salisaeta longa RepID=UPI0003B6E51C
sw_4_scaffold_524_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13747..14778)
DNA (1032bp) protein (344aa)
Peptidase, M50 family protein {ECO:0000313|EMBL:ABC46174.1}; EC=3.4.24.- {ECO:0000313|EMBL:ABC46174.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
Peptidase, M50 family protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3S3_SALRD
peptidase, M50 family protein
sw_4_scaffold_524_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15050..16192
DNA (1143bp) protein (381aa)
thiamine-monophosphate kinase n=1 Tax=Salisaeta longa RepID=UPI0003B43924
thiL; thiamine-monophosphate kinase
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128, ECO:0000313|EMBL:CBH25565.1}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Ru
sw_4_scaffold_524_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16270..18015)
DNA (1746bp) protein (582aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MCY1_RHOM4
PAS/PAC sensor signal transduction histidine kinase
sw_4_scaffold_524_15
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(18043..22584)
DNA (4542bp) protein (1514aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00035E2B86
PAS fold family {ECO:0000313|EMBL:EDX77922.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes PCC 7420
multi-sensor hybrid histidine kinase
sw_4_scaffold_524_16
RLO_PLX_64_10, Bacteria

Not on your lists

comp(22581..23378)
DNA (798bp) protein (266aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CX53_9BACT
multi-sensor hybrid histidine kinase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
histidine kinase-response regulator hybrid protein
sw_4_scaffold_524_17
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

23718..24710
DNA (993bp) protein (331aa)
deoxyfructose oxidoreductase n=1 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0002F35C4B
oxidoreductase domain-containing protein Tax=CG_OP9-01
oxidoreductase domain-containing protein
sw_4_scaffold_524_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24754..25863)
DNA (1110bp) protein (370aa)
Erythronate-4-phosphate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01825}; EC=1.1.1.290 {ECO:0000255|HAMAP-Rule:MF_01825};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incerta
Erythronate-4-phosphate dehydrogenase n=2 Tax=Salinibacter ruber RepID=PDXB_SALRD
pdxB; erythronate-4-phosphate dehydrogenase
sw_4_scaffold_524_19
unknown

Not on your lists

26238..26423
DNA (186bp) protein (62aa)

This feature has no annotations

sw_4_scaffold_524_20
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26464..26925
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFK9_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN72179.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
sw_4_scaffold_524_21
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26988..28043
DNA (1056bp) protein (352aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDG0_RHOM4
endonuclease/exonuclease/phosphatase
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:ACY47153.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodother
sw_4_scaffold_524_22
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28192..28896
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B3FC82
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACY49407.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" s
sw_4_scaffold_524_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28927..29565)
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B7771F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25222.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_524_24
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

29767..30897
DNA (1131bp) protein (377aa)
Glycosyl transferase group 1 n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFK6_RHOMR
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:AEN72176.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
sw_4_scaffold_524_25
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(30953..32629)
DNA (1677bp) protein (559aa)
Na+/solute symporter n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIS5_RHOM4
Na+/solute symporter
Na+/solute symporter {ECO:0000313|EMBL:ACY48383.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus
sw_4_scaffold_524_26
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(32729..33070)
DNA (342bp) protein (114aa)
RNA polymerase subunit sigma-32 n=1 Tax=Salisaeta longa RepID=UPI0003B32777
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY48384.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
sw_4_scaffold_524_27
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(33207..35201)
DNA (1995bp) protein (665aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-R
acetyl-CoA synthetase n=1 Tax=Salisaeta longa RepID=UPI0003B4A533
acetate/CoA ligase
sw_4_scaffold_524_28
Desulfonatronum thiodismutans, Desulfonatronum, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35384..36145)
DNA (762bp) protein (254aa)
Para-aminobenzoate synthase subunit I n=1 Tax=Burkholderia sp. SJ98 RepID=K8R3N6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:AIE18119.1}; TaxID=159290 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfonatronumaceae; Desulfonatronum.;" source="Desulfo
Para-aminobenzoate synthase subunit I
sw_4_scaffold_524_29
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(36192..37415)
DNA (1224bp) protein (408aa)
para-aminobenzoate synthase subunit I (EC:4.1.3.38 4.1.3.27)
Para-aminobenzoate synthase, subunit I {ECO:0000313|EMBL:AEN72693.1}; EC=4.1.3.27 {ECO:0000313|EMBL:AEN72693.1};; EC=4.1.3.38 {ECO:0000313|EMBL:AEN72693.1};; TaxID=762570 species="Bacteria; Bacteroide
Para-aminobenzoate synthase, subunit I n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIR5_RHOMR
sw_4_scaffold_524_30
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(37532..38389)
DNA (858bp) protein (286aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Displaying items 1-30 of 31 in total

View Taxonomy