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sw_4_scaffold_529

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_529_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1..2430)
DNA (2430bp) protein (810aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH44_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY47829.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
sw_4_scaffold_529_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2805..3251)
DNA (447bp) protein (149aa)
hypothetical protein
hypothetical protein; K15977 putative oxidoreductase id=24657276 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
DoxD-like family protein {ECO:0000313|EMBL:ABC45379.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
sw_4_scaffold_529_3
unknown

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comp(3432..3623)
DNA (192bp) protein (64aa)

This feature has no annotations

sw_4_scaffold_529_4
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3902..4057)
DNA (156bp) protein (52aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CKF3_DESK7
tRNA pseudouridine synthase A
sw_4_scaffold_529_5
unknown

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4123..4452
DNA (330bp) protein (110aa)

This feature has no annotations

sw_4_scaffold_529_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4640..5200
DNA (561bp) protein (187aa)
shikimate kinase (EC:2.7.1.71)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroi
Shikimate kinase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFA7_RHOM4
sw_4_scaffold_529_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5305..6708
DNA (1404bp) protein (468aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
histidine kinase n=1 Tax=Salisaeta longa RepID=UPI0003B44030
vicK; Sensor histidine kinase
sw_4_scaffold_529_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6773..8266)
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIM8_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY48336.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
sw_4_scaffold_529_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8286..9077)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIM7_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY48335.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
sw_4_scaffold_529_10
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(9370..11073)
DNA (1704bp) protein (568aa)
Glycosidase n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WKJ2_9CYAN
glycosidase
Glycosidase {ECO:0000313|EMBL:AFZ20331.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
sw_4_scaffold_529_11
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11181..11594)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JLZ3_9BACT
SPW repeat protein
Uncharacterized protein {ECO:0000313|EMBL:ELR69956.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
sw_4_scaffold_529_12
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11684..12325)
DNA (642bp) protein (214aa)
Putative membrane protein n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N1M8_9BACT
Putative membrane protein {ECO:0000313|EMBL:EMR02593.1}; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis A
vitamin K epoxide reductase
sw_4_scaffold_529_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12517..12759)
DNA (243bp) protein (81aa)
ideR; Iron dependent repressor
ideR; Iron dependent repressor; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator id=24657978 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Iron dependent repressor, putative {ECO:0000313|EMBL:ABC46176.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salini
sw_4_scaffold_529_14
Streptomycetaceae bacterium MP113-05, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13379..13717)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Streptomycetaceae bacterium MP113-05 RepID=V6KYN8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EST34104.1}; TaxID=1380770 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae.;" source="Streptomycetaceae bacterium MP113-05.;"
hypothetical protein
sw_4_scaffold_529_15
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13766..14122)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Streptomyces sp. MspMP-M5 RepID=UPI00037EE7F5
Uncharacterized protein {ECO:0000313|EMBL:KIF81509.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum s
hypothetical protein
sw_4_scaffold_529_16
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(14824..15108)
DNA (285bp) protein (95aa)
caa(3)-type oxidase subunit IV; K02277 cytochrome c oxidase subunit IV [EC:1.9.3.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Caa(3)-type oxidase, subunit IV n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGH8_SINAD
caa(3)-type oxidase, subunit IV
sw_4_scaffold_529_17
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(15191..15361)
DNA (171bp) protein (57aa)
cytochrome c oxidase subunit III; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Cytochrome c oxidase subunit III n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IGZ8_9CHLR
cytochrome c oxidase subunit III
Displaying 17 items

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