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sw_4_scaffold_544

Search features with annotation key words

Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_544_1
unknown

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1..102
DNA (102bp) protein (34aa)

This feature has no annotations

sw_4_scaffold_544_2
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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99..320
DNA (222bp) protein (74aa)
KEOPS complex Pcc1-like subunit n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K857_9EURY
KEOPS complex Pcc1-like subunit {ECO:0000313|EMBL:EMA16000.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolyt
hypothetical protein
sw_4_scaffold_544_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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317..961
DNA (645bp) protein (215aa)
30S ribosomal protein S3Ae n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQD5_NATM8
rps1e; 30S ribosomal protein S1e
30S ribosomal protein S3Ae {ECO:0000256|HAMAP-Rule:MF_00359, ECO:0000256|SAAS:SAAS00194211}; Ribosomal protein S1e {ECO:0000256|HAMAP-Rule:MF_00359}; TaxID=268739 species="Archaea; Euryarchaeota; Halo
sw_4_scaffold_544_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(969..1334)
DNA (366bp) protein (122aa)
Halocyanin n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQ89_NATPD
halocyanin-like protein (copper-containing protein) 3
Halocyanin {ECO:0000313|EMBL:CAI49707.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain ATCC 356
sw_4_scaffold_544_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1427..2101
DNA (675bp) protein (225aa)
pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8)
CDP-alcohol 1-archaetidyltransferase {ECO:0000313|EMBL:CAI49706.1}; EC=2.7.8.- {ECO:0000313|EMBL:CAI49706.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
CDP-alcohol phosphatidyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQ90_NATPD
sw_4_scaffold_544_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2083..2709)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CD05_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ21125.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_4_scaffold_544_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2702..3823)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CCX6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ21126.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
DUF3179 family protein
sw_4_scaffold_544_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4045..5313
DNA (1269bp) protein (423aa)
phycocyanobilin lyase subunit (EC:4.-.-.-)
HEAT-PBS family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQ91_NATPD
HEAT-PBS family protein {ECO:0000313|EMBL:CAI49705.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_4_scaffold_544_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5636..7147
DNA (1512bp) protein (504aa)
Phospholipase D n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKK4_NATM8
phospholipase D
Phospholipase D domain protein {ECO:0000313|EMBL:CCQ36058.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolap
sw_4_scaffold_544_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7191..8192)
DNA (1002bp) protein (334aa)
RecJ domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQ93_NATPD
hypothetical protein
DHH/RecJ family phosphoesterase {ECO:0000313|EMBL:CAI49703.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas phara
sw_4_scaffold_544_11
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8224..8745
DNA (522bp) protein (174aa)
Uncharacterized protein id=24621940 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
Uncharacterized protein {ECO:0000313|EMBL:ERH00340.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
sw_4_scaffold_544_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9083..9586
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQ94_NATPD
hypothetical protein
JAB domain protein {ECO:0000313|EMBL:CAI49702.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_4_scaffold_544_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9588..10010
DNA (423bp) protein (141aa)
FAD synthase {ECO:0000255|HAMAP-Rule:MF_02115}; EC=2.7.7.2 {ECO:0000255|HAMAP-Rule:MF_02115};; FMN adenylyltransferase {ECO:0000255|HAMAP-Rule:MF_02115}; Flavin adenine dinucleotide synthase {ECO:0000
FAD synthase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RIBL_NATPD
glycerol-3-phosphate cytidyltransferase-like protein
sw_4_scaffold_544_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10007..11098)
DNA (1092bp) protein (364aa)
Probable glycosyltransferase, type 1 {ECO:0000313|EMBL:CAI49700.1}; EC=2.4.-.- {ECO:0000313|EMBL:CAI49700.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
Probable glycosyltransferase, type 1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQ96_NATPD
hexosyltransferase 2
sw_4_scaffold_544_15
unknown

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11261..11707
DNA (447bp) protein (149aa)

This feature has no annotations

sw_4_scaffold_544_16
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(12502..12960)
DNA (459bp) protein (153aa)
Uncharacterized protein n=2 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L9YNU4_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY75799.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
sw_4_scaffold_544_17
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(12964..14241)
DNA (1278bp) protein (426aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SY76_NATMM
peptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ADD06047.1}; Peptide ABC transporter ATPase {ECO:0000313|EMBL:ELY30956.1}; TaxID=547559 species="Archaea; Euryarchaeota; Haloba
sw_4_scaffold_544_18
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(14295..15635)
DNA (1341bp) protein (447aa)
oligopeptide/dipeptide ABC transporter ATPase (EC:3.6.3.24)
Oligopeptide/dipeptide ABC transporter ATPase n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9WNH8_9EURY
Oligopeptide/dipeptide ABC transporter ATPase {ECO:0000313|EMBL:ELY51025.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronoc
sw_4_scaffold_544_19
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(15635..17365)
DNA (1731bp) protein (577aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0A9W0_9EURY
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADD06049.1}; Binding-protein-dependent transporters inner membrane component {ECO:0000313|EMBL:ELY30954.1}; TaxID
sw_4_scaffold_544_20
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(17367..18404)
DNA (1038bp) protein (346aa)
ABC transporter integral membrane protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P0H5_9EURY
ABC transporter integral membrane protein {ECO:0000313|EMBL:EMA63546.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum ko
ABC-type dipeptide/oligopeptide/nickel transport system, permease component
sw_4_scaffold_544_21
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(18532..20412)
DNA (1881bp) protein (627aa)
ABC-type transporter, periplasmic subunit n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D3B0_HALXS
ABC transporter periplasmic protein
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AEH38545.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanadue
Displaying 21 items

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