ggKbase home page

sw_4_scaffold_569

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_569_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..921
DNA (921bp) protein (307aa)
Replication factor C small subunit n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITA9_NATPD
rfcC; replication factor C small subunit 2
Replication factor C small subunit {ECO:0000313|EMBL:CAI48625.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas ph
sw_4_scaffold_569_2
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(922..1296)
DNA (375bp) protein (125aa)
imd1; inosine monophosphate dehydrogenase (EC:1.1.1.205)
Inosine monophosphate dehydrogenase {ECO:0000313|EMBL:AEM56629.1}; EC=1.1.1.205 {ECO:0000313|EMBL:AEM56629.1};; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SQD7_9EURY
sw_4_scaffold_569_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1354..2313)
DNA (960bp) protein (320aa)
trmG10; tRNA (guanine(10),N(2))-dimethyltransferase (EC:2.1.1.213)
tRNA (Guanine(10),N(2))-dimethyltransferase {ECO:0000313|EMBL:CCQ37625.1}; EC=2.1.1.213 {ECO:0000313|EMBL:CCQ37625.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
tRNA (Guanine(10),N(2))-dimethyltransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLF5_NATM8
sw_4_scaffold_569_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2630..3193
DNA (564bp) protein (188aa)
TATA-box-binding protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=TBP_NATPD
tbpE; transcription factor
TATA-box-binding protein {ECO:0000255|HAMAP-Rule:MF_00408}; Box A-binding protein {ECO:0000255|HAMAP-Rule:MF_00408}; Short=BAP {ECO:0000255|HAMAP-Rule:MF_00408};; TATA sequence-binding protein {ECO:00
sw_4_scaffold_569_5
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3230..3580
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZU3_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46851.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_4_scaffold_569_6
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4050..4916)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HPG5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ85648.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513
sw_4_scaffold_569_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5006..5851)
DNA (846bp) protein (282aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00079}; Short=ATP-PRT {ECO:0000255|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000255|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000255|HAMAP-R
ATP phosphoribosyltransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XYX5_NATM8
sw_4_scaffold_569_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5946..7244
DNA (1299bp) protein (433aa)
guaD_1; nucleoside deaminase 1 (cytosine deaminase, guanine deaminase ) (EC:3.5.4.3 3.5.4.1)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000255|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000255|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000255|HAMAP-Rule:MF_01281};; EC
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=MTAD_NATPD
sw_4_scaffold_569_9
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7375..8379
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DSG4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA34035.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
sw_4_scaffold_569_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8539..9753
DNA (1215bp) protein (405aa)
ahcY; adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
Adenosylhomocysteinase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XP65_NATM8
sw_4_scaffold_569_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


10178..11683
DNA (1506bp) protein (502aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000313|EMBL:CAI48439.1}; EC=6.1.1.20 {ECO:0000313|EMBL:CAI48439.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobac
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITU4_NATPD
sw_4_scaffold_569_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


11683..12720
DNA (1038bp) protein (346aa)
pheT; phenylalanine--tRNA ligase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00284};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284};
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XU55_NATM8
Displaying 12 items

View Taxonomy