ggKbase home page

sw_4_scaffold_667

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_667_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..576)
DNA (576bp) protein (192aa)
AAA-type ATPase (CDC48 subfamily) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y260_NATM8
cdc48a; AAA-type ATPase (CDC48 subfamily)
AAA-type ATPase (CDC48 subfamily) {ECO:0000313|EMBL:CCQ36559.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moo
sw_4_scaffold_667_2
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1471..2370
DNA (900bp) protein (300aa)
DMT(Drug/metabolite transporter) superfamily permease n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L2T0_HALJP
DMT(Drug/metabolite transporter) superfamily permease {ECO:0000313|EMBL:EMA27841.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" sourc
hypothetical protein
sw_4_scaffold_667_3
unknown

Not on your lists

comp(2375..2713)
DNA (339bp) protein (113aa)

This feature has no annotations

sw_4_scaffold_667_4
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3037..4074)
DNA (1038bp) protein (346aa)
adh7; alcohol dehydrogenase (EC:1.1.1.1)
Alcohol dehydrogenase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KAG1_9EURY
IMP dehydrogenase {ECO:0000313|EMBL:AJF27739.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_4_scaffold_667_5
unknown

Not on your lists

comp(4373..4624)
DNA (252bp) protein (84aa)

This feature has no annotations

sw_4_scaffold_667_6
unknown

Not on your lists

comp(4922..5251)
DNA (330bp) protein (110aa)

This feature has no annotations

sw_4_scaffold_667_7
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5381..6484
DNA (1104bp) protein (368aa)
UPF0272 protein C457_14394 n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G6S2_9EURY
UPF0272 protein C457_14394 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense DSM
UPF0272 family protein
sw_4_scaffold_667_8
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6481..6624
DNA (144bp) protein (48aa)
UPF0272 protein C435_21400 n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JKX4_9EURY
UPF0272 protein C435_21400 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula california
hypothetical protein
sw_4_scaffold_667_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6643..7356)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISA3_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48984.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_4_scaffold_667_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


7491..8192
DNA (702bp) protein (234aa)
DNA repair and recombination protein RadB n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISA2_NATPD
radB; DNA repair and recombination protein RadB
DNA repair and recombination protein RadB {ECO:0000256|HAMAP-Rule:MF_00350}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natr
sw_4_scaffold_667_11
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8200..9354)
DNA (1155bp) protein (385aa)
CBS domain protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSQ0_NATM8
cbs1; CBS domain protein
CBS domain protein {ECO:0000313|EMBL:CCQ37405.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (strai
sw_4_scaffold_667_12
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9425..9724
DNA (300bp) protein (100aa)
Lycopene cyclase domain-containing protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9WYG4_9EURY
Lycopene cyclase {ECO:0000313|EMBL:KDE59018.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
lycopene cyclase domain-containing protein
sw_4_scaffold_667_13
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9790..10713
DNA (924bp) protein (308aa)
short-chain dehydrogenase id=24644252 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Dehydrogenase {ECO:0000313|EMBL:ERH08484.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
daunorubicin C-13 ketoreductase
sw_4_scaffold_667_trna_1
unknown

Not on your lists

comp(11388..11462)
DNA (75bp)
transferRNA
sw_4_scaffold_667_14
unknown

Not on your lists

11665..12762
DNA (1098bp) protein (366aa)

This feature has no annotations

sw_4_scaffold_667_15
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12819..14120)
DNA (1302bp) protein (434aa)
IS1341-type transposase n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KXB1_9EURY
IS1341-type transposase {ECO:0000313|EMBL:EMA24879.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
IS1341-type transposase
sw_4_scaffold_667_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14370..15380
DNA (1011bp) protein (337aa)
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00211}; EC=2.4.2.18 {ECO:0000255|HAMAP-Rule:MF_00211};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
Anthranilate phosphoribosyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=TRPD_NATPD
sw_4_scaffold_667_17
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15377..16003
DNA (627bp) protein (209aa)
trpF; phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135};; TaxID=268739 species="Arch
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y158_NATM8
sw_4_scaffold_667_18
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16915..17451
DNA (537bp) protein (179aa)
trpE1; anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase component 1 {ECO:0000313|EMBL:CCQ36226.1}; EC=4.1.3.27 {ECO:0000313|EMBL:CCQ36226.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriace
Anthranilate synthase component I n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQ40_NATM8
sw_4_scaffold_667_19
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17448..18038
DNA (591bp) protein (197aa)
trpG_1; anthranilate synthase, component II 1 (EC:4.1.3.27)
Anthranilate synthase component 2 {ECO:0000313|EMBL:CAI49763.1}; EC=4.1.3.27 {ECO:0000313|EMBL:CAI49763.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriace
Anthranilate synthase component II n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQ35_NATPD
sw_4_scaffold_667_20
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18515..20164
DNA (1650bp) protein (550aa)
Ribonucleoside-diphosphate reductase {ECO:0000313|EMBL:AKH98210.1}; EC=1.17.4.1 {ECO:0000313|EMBL:AKH98210.1};; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
nrdJ; ribonucleoside-diphosphate reductase,adenosylcobalamin-dependent (intein-containing) (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1N8F6_9EURY
Displaying 21 items

View Taxonomy