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sw_4_scaffold_734

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_734_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2..259
DNA (258bp) protein (86aa)
Putative cold shock-like protein cspG n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S297_SALRD
cold shock-like protein cspG
Putative cold shock-like protein cspG {ECO:0000313|EMBL:ABC43651.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sal
sw_4_scaffold_734_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(646..1299)
DNA (654bp) protein (218aa)
hisH; imidazole glycerol phosphate synthase subunit HisH; K02501 glutamine amidotransferase [EC:2.4.2.-] id=24659514 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278, ECO:0000313|EMBL:CBH24680.1};; IGP synthase glutamine amidotransferas
hisH; imidazole glycerol phosphate synthase subunit HisH
sw_4_scaffold_734_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1392..2210)
DNA (819bp) protein (273aa)
Pyrroline-5-carboxylate reductase n=2 Tax=Salinibacter ruber RepID=D5H9H4_SALRM
proC; pyrroline-5-carboxylate reductase
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000313|EMBL:CBH24679.1}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};;
sw_4_scaffold_734_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2328..2936)
DNA (609bp) protein (203aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|SAAS:SAAS00218099}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, E
Imidazoleglycerol-phosphate dehydratase n=2 Tax=Salinibacter ruber RepID=HIS7_SALRD
hisB; imidazoleglycerol-phosphate dehydratase
sw_4_scaffold_734_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3213..3539
DNA (327bp) protein (109aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24677.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
hypothetical protein id=24659511 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_4_scaffold_734_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3760..4680
DNA (921bp) protein (307aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:
Methionine--tRNA ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9H1_SALRM
Suspect SCG annotation. See neighboring gene [sw_4_scaffold_734_7].
metG; methionyl-tRNA synthetase
sw_4_scaffold_734_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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4620..5810
DNA (1191bp) protein (397aa)
metG; methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] id=24659510 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Methionine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00098}; EC=6.1.1.10 {ECO:0000255|HAMAP-Rule:MF_00098};; Methionyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00098}; Short=MetRS {ECO:0000255|HAMAP-R
metG; methionyl-tRNA synthetase
sw_4_scaffold_734_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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6020..6742
DNA (723bp) protein (241aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {E
MTA/SAH nucleosidase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2A4_SALRD
mtnN; MTA/SAH nucleosidase
sw_4_scaffold_734_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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6858..8312
DNA (1455bp) protein (485aa)
hemA; glutamyl-tRNA reductase; K02492 glutamyl-tRNA reductase [EC:1.2.1.70] id=24659507 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Glutamyl-tRNA reductase {ECO:0000255|HAMAP-Rule:MF_00087}; Short=GluTR {ECO:0000255|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000255|HAMAP-Rule:MF_00087};; TaxID=309807 species="Bacteria; Bacteroidetes
hemA; glutamyl-tRNA reductase
sw_4_scaffold_734_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8414..9400
DNA (987bp) protein (329aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260, ECO:0000313|EMBL:CBH24673.1}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260, ECO:0000313|EMBL:C
Porphobilinogen deaminase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9G8_SALRM
hemC; porphobilinogen deaminase
sw_4_scaffold_734_11
Pantoea dispersa, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9476..9958)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Anoxybacillus kamchatkensis RepID=UPI0002EAA614
Uncharacterized protein {ECO:0000313|EMBL:ERH66019.1}; TaxID=1358411 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea dispersa
hypothetical protein
sw_4_scaffold_734_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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9973..10896
DNA (924bp) protein (308aa)
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:CBH24672.1}; EC=4.2.1.75 {ECO:0000313|EMBL:CBH24672.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
Uroporphyrinogen-III synthase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9G7_SALRM
hemD; uroporphyrinogen-III synthase
sw_4_scaffold_734_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10908..11591)
DNA (684bp) protein (228aa)
Thiamine-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00097}; Short=TP synthase {ECO:0000255|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000255|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000255|HAMAP-Rule:MF
Thiamine-phosphate synthase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9G6_SALRM
thiE; thiamine-phosphate pyrophosphorylase
sw_4_scaffold_734_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11994..12911
DNA (918bp) protein (306aa)
hydroxypyruvate reductase; K00050 hydroxypyruvate reductase [EC:1.1.1.81] id=24659502 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hydroxypyruvate reductase
Hydroxypyruvate reductase {ECO:0000313|EMBL:ABC46324.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
sw_4_scaffold_734_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12908..13135
DNA (228bp) protein (76aa)
Hydroxypyruvate reductase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2B0_SALRD
ttuD; hydroxypyruvate reductase
Hydroxypyruvate reductase {ECO:0000313|EMBL:ABC46324.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
sw_4_scaffold_734_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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13624..15837
DNA (2214bp) protein (738aa)
Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2B1_SALRD
zinc-dependent carboxypeptidase domain-containing protein
Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain {ECO:0000313|EMBL:ABC45999.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sed
Displaying 16 items

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