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sw_4_scaffold_78

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_78_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1..294)
DNA (294bp) protein (98aa)
aminotransferase; K00824 D-alanine transaminase [EC:2.6.1.21] id=24657392 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
aminotransferase
Aminotransferase, class IV superfamily {ECO:0000313|EMBL:ABC43848.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
sw_4_scaffold_78_2
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(658..1647)
DNA (990bp) protein (330aa)
Peptidase M15A n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FBW1_DESAA
peptidase M15A
Peptidase M15A {ECO:0000313|EMBL:ACL05166.1}; Flags: Precursor;; TaxID=439235 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source
sw_4_scaffold_78_3
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(1849..2133)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B4F1DF
DNA polymerase subunit beta
DNA polymerase, beta domain protein region {ECO:0000313|EMBL:ABQ90906.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" sour
sw_4_scaffold_78_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2259..2906)
DNA (648bp) protein (216aa)
pdxH; pyridoxamine 5'-phosphate oxidase; K00275 pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] id=24657394 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000255|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000255|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000255|HAMAP-Rule:MF_01629}; Short=PNPOx {ECO:00002
pdxH; pyridoxamine 5'-phosphate oxidase
sw_4_scaffold_78_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3160..4023
DNA (864bp) protein (288aa)
Proline dehydrogenase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H698_SALRM
proline dehydrogenase
Proline dehydrogenase {ECO:0000313|EMBL:CBH23553.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
sw_4_scaffold_78_6
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4428..5642)
DNA (1215bp) protein (405aa)
Threonine synthase n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R6Q6_PIRSD
Threonine synthase {ECO:0000313|EMBL:ETX07267.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
threonine synthase
sw_4_scaffold_78_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5684..6223)
DNA (540bp) protein (180aa)
Appr-1-p processing enzyme family protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H699_SALRM
Appr-1-p processing enzyme family protein
Appr-1-p processing enzyme family protein {ECO:0000313|EMBL:CBH23554.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source=
sw_4_scaffold_78_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6460..7296
DNA (837bp) protein (279aa)
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:CBH23555.1}; EC=2.1.1.64 {ECO:0000313|EMBL:CBH23555.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae se
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6A0_SALRM
ubiG; 3-demethylubiquinone-9 3-methyltransferase
sw_4_scaffold_78_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7920..8324
DNA (405bp) protein (135aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000313|EMBL:CBH23556.1}; EC=1.1.1.205 {ECO:0000313|EMBL:CBH23556.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6A1_SALRM
Inosine-5'-monophosphate dehydrogenase
sw_4_scaffold_78_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8452..10176
DNA (1725bp) protein (575aa)
pyrG; CTP synthetase; K01937 CTP synthase [EC:6.3.4.2] id=24657400 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_0
pyrG; CTP synthase
sw_4_scaffold_78_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10233..10883)
DNA (651bp) protein (217aa)
LexA repressor {ECO:0000313|EMBL:CBH23558.1}; EC=3.4.21.88 {ECO:0000313|EMBL:CBH23558.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salin
LexA repressor n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6A3_SALRM
lexA; LexA repressor
sw_4_scaffold_78_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11265..11705
DNA (441bp) protein (147aa)
mraZ; mraZ protein
mraZ; mraZ protein; K03925 MraZ protein id=24657402 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
sw_4_scaffold_78_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11740..12750
DNA (1011bp) protein (337aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_0100
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6A5_SALRM
mraW; S-adenosyl-methyltransferase mraW
sw_4_scaffold_78_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12791..13276
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6A6_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23561.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_78_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13344..15287
DNA (1944bp) protein (648aa)
penicillin-binding protein 3; K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] id=24657405 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
penicillin-binding protein 3
Penicillin-binding protein 3 {ECO:0000313|EMBL:ABC44469.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_4_scaffold_78_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15292..16842
DNA (1551bp) protein (517aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000313|EMBL:CBH23563.1};; Meso-A2pm-adding e
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6A8_SALRM
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
sw_4_scaffold_78_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16942..18099
DNA (1158bp) protein (386aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase; K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] id=24657407 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000255|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000255|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000255|HAMAP-Rule:
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase
sw_4_scaffold_78_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18159..19610
DNA (1452bp) protein (484aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutam
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6B0_SALRM
murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase
sw_4_scaffold_78_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19738..20886
DNA (1149bp) protein (383aa)
Cell division protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6B1_SALRM
ftsW; cell division protein
Cell division protein {ECO:0000313|EMBL:CBH23566.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
sw_4_scaffold_78_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20974..22170
DNA (1197bp) protein (399aa)
murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] id=24657410 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000255|HAMAP-Rule:MF_00033}; EC=2.4.1.227 {ECO:0000255|HAMAP-Rule:MF_00033};;
murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
sw_4_scaffold_78_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22253..23674
DNA (1422bp) protein (474aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|SAAS:SAAS00243344, ECO:0000313|EMBL:CBH23567.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bactero
UDP-N-acetylmuramate--alanine ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6B2_SALRM
murC; UDP-N-acetylmuramate--L-alanine ligase
sw_4_scaffold_78_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23864..24442
DNA (579bp) protein (193aa)
ftsQ protein
ftsQ protein; K03589 cell division protein FtsQ id=24657412 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Cell division protein FtsQ {ECO:0000255|HAMAP-Rule:MF_00911}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
sw_4_scaffold_78_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24506..25765
DNA (1260bp) protein (420aa)
Cell division protein ftsA n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6B4_SALRM
ftsA; cell division protein ftsA
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101, ECO:0000313|EMBL:CBH23569.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
sw_4_scaffold_78_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25937..27241
DNA (1305bp) protein (435aa)
Cell division protein FtsZ n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6B5_SALRM
ftsZ2; cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sal
sw_4_scaffold_78_25
unknown

Not on your lists

27748..27942
DNA (195bp) protein (65aa)

This feature has no annotations

Displaying 25 items

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