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sw_4_scaffold_942

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_942_1
unknown

Not on your lists

comp(1..78)
DNA (78bp) protein (26aa)

This feature has no annotations

sw_4_scaffold_942_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(104..544)
DNA (441bp) protein (147aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
Sensory transduction histidine kinase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6U4_SALRM
ntrB; sensory transduction histidine kinase
sw_4_scaffold_942_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(492..4151)
DNA (3660bp) protein (1220aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
sensory transduction histidine kinase
sensory transduction histidine kinase id=24657521 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_4_scaffold_942_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4260..4721)
DNA (462bp) protein (154aa)
hypothetical protein
hypothetical protein id=24657520 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44904.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_942_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4906..5871)
DNA (966bp) protein (322aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD binding domain-containing protein
D-isomer specific 2-hydroxyacid dehydrogenase NAD binding domain-containing protein id=24657519 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein {ECO:0000313|EMBL:ABC45940.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
sw_4_scaffold_942_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6034..8499)
DNA (2466bp) protein (822aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=309807 species="Bacteria; Bacte
MutS2 family protein
MutS2 family protein; K07456 DNA mismatch repair protein MutS2 id=24657518 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_4_scaffold_942_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8773..9759)
DNA (987bp) protein (329aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:CBH23745.1}; EC=2.7.7.24 {ECO:0000313|EMBL:CBH23745.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sed
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6U0_SALRM
strD; glucose-1-phosphate thymidylyltransferase
sw_4_scaffold_942_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10418..11332
DNA (915bp) protein (305aa)
hypothetical protein
hypothetical protein id=24657516 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Tetratricopeptide repeat domain protein {ECO:0000313|EMBL:ABC44687.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
sw_4_scaffold_942_9
unknown

Not on your lists

11322..11585
DNA (264bp) protein (88aa)

This feature has no annotations

sw_4_scaffold_942_10
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(11953..12990)
DNA (1038bp) protein (346aa)
nucleoside-diphosphate sugar epimerase n=1 Tax=Salisaeta longa RepID=UPI0003B519C1
nucleoside-diphosphate-sugar epimerase Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
NAD-dependent epimerase/dehydratase
sw_4_scaffold_942_11
unknown

Not on your lists

comp(12942..13142)
DNA (201bp) protein (67aa)

This feature has no annotations

sw_4_scaffold_942_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13625..14056)
DNA (432bp) protein (144aa)
hypothetical protein
hypothetical protein id=24657514 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45647.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_942_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14197..14562)
DNA (366bp) protein (122aa)
chorismate mutase
chorismate mutase id=24657513 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative chorismate mutase {ECO:0000313|EMBL:ABC44535.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
sw_4_scaffold_942_14
endosymbiont of Tevnia jerichonana, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14991..16091)
DNA (1101bp) protein (367aa)
UDP-N-acetylgalactosaminyltransferase n=2 Tax=sulfur-oxidizing symbionts RepID=G2DHF6_9GAMM
Glycosyl transferase group 1 {ECO:0000313|EMBL:EGW53867.1}; TaxID=1049564 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Tevnia jerichona
group 1 glycosyl transferase
sw_4_scaffold_942_15
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16173..17090)
DNA (918bp) protein (306aa)
Uncharacterized protein n=3 Tax=Rhizobium meliloti RepID=M4MNU3_RHIML
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG71755.1}; TaxID=1286640 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" so
sw_4_scaffold_942_16
Aphanizomenon flos-aquae, Aphanizomenon, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(17093..18061)
DNA (969bp) protein (323aa)
SEC-C motif domain protein (Modular protein) n=1 Tax=Microcystis sp. T1-4 RepID=I4IBJ5_9CHRO
Zinc chelation protein SecC {ECO:0000313|EMBL:KHG40752.1}; TaxID=1532906 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Aphanizomenon.;" source="Aphanizomenon flos-aquae 2012/KM1/D3.;"
hypothetical protein
sw_4_scaffold_942_17
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18106..19143)
DNA (1038bp) protein (346aa)
Group 1 glycosyl transferase n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9X1V9_9EURY
Group 1 glycosyl transferase {ECO:0000313|EMBL:ELY55715.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DS
glycosyltransferase
sw_4_scaffold_942_18
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19261..20550)
DNA (1290bp) protein (430aa)
O-antigen polymerase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUF0_PARL1
O-antigen polymerase
O-antigen polymerase {ECO:0000313|EMBL:ABS63533.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans
sw_4_scaffold_942_19
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

comp(20610..21323)
DNA (714bp) protein (238aa)
Glycosyl transferase family 2 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUE9_PARL1
glycosyl transferase family protein Tax=RBG_13_WOR_2_41_10_curated
glycosyl transferase family protein
Displaying 19 items

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