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sw_4_scaffold_958

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_958_1
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..739)
DNA (738bp) protein (246aa)
FG-GAP repeat protein n=1 Tax=Pseudomonas syringae pv. tabaci str. ATCC 11528 RepID=F3JTZ4_PSESZ
FG-GAP repeat {ECO:0000313|EMBL:KFG91924.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovora
ASPIC/UnbV domain protein
sw_4_scaffold_958_2
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1087..1857
DNA (771bp) protein (257aa)
Transcriptional regulator, DeoR family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIN8_CHIPD
DeoR family transcriptional regulator
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:ACU58227.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chi
sw_4_scaffold_958_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1864..2541)
DNA (678bp) protein (226aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=Q2S1G2_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24986.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_958_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2772..3944)
DNA (1173bp) protein (391aa)
iscS; cysteine desulfurase; K04487 cysteine desulfurase [EC:2.8.1.7] id=24659816 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Cysteine desulfurase {ECO:0000313|EMBL:ABC44186.1}; EC=2.8.1.7 {ECO:0000313|EMBL:ABC44186.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; S
iscS; cysteine desulfurase
sw_4_scaffold_958_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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4257..5576
DNA (1320bp) protein (440aa)
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] id=24659817 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase
sw_4_scaffold_958_6
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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5681..7078
DNA (1398bp) protein (466aa)
Putative dehydrogenase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D548_SINAD
dehydrogenase
Putative dehydrogenase {ECO:0000313|EMBL:AGA24564.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acid
sw_4_scaffold_958_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(7297..8145)
DNA (849bp) protein (283aa)
MazG family protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3J2_SALRD
MazG family protein
MazG family protein {ECO:0000313|EMBL:ABC45775.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
sw_4_scaffold_958_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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8297..10117
DNA (1821bp) protein (607aa)
amidohydrolase
amidohydrolase id=24657833 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Amidohydrolase family protein {ECO:0000313|EMBL:CBH25041.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_4_scaffold_958_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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10266..11693
DNA (1428bp) protein (476aa)
Amidohydrolase family protein n=2 Tax=Salinibacter ruber RepID=D5HAI7_SALRM
amidohydrolase
Amidohydrolase family protein {ECO:0000313|EMBL:CBH25042.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_4_scaffold_958_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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11741..13084
DNA (1344bp) protein (448aa)
Amidohydrolase family protein n=2 Tax=Salinibacter ruber RepID=D5HAI8_SALRM
amidohydrolase
Putative amidohydrolase {ECO:0000313|EMBL:ABC44755.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_958_11
unknown

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13173..13484
DNA (312bp) protein (104aa)

This feature has no annotations

sw_4_scaffold_958_12
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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13519..13953
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EFF9_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI48305.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 2953
sw_4_scaffold_958_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14111..15226)
DNA (1116bp) protein (372aa)
Chalcone synthase, putative {ECO:0000313|EMBL:ABC45053.1}; EC=2.3.1.- {ECO:0000313|EMBL:ABC45053.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
chalcone synthase
chalcone synthase id=24659344 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_4_scaffold_958_14
RBG_19FT_COMBO_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

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15368..15640
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EI09_9CHLR
hypothetical protein
CDGSH-type zinc finger protein Tax=RBG_19FT_COMBO_Chloroflexi_50_10_curated
sw_4_scaffold_958_15
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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15649..17034
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EI09_9CHLR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCF84321.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
Displaying 15 items

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