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sw_4_scaffold_310_15

Organism: SW_4_UNK

megabin RP 51 / 55 MC: 43 BSCG 44 / 51 MC: 35 ASCG 38 / 38 MC: 38
Location: 13229..13978

Top 3 Functional Annotations

Value Algorithm Source
mechanosensitive ion channel protein MscS n=1 Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B500D8 similarity UNIREF
DB: UNIREF100
  • Identity: 55.3
  • Coverage: 215.0
  • Bit_score: 235
  • Evalue 7.70e-59
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:AJY68579.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Ge similarity UNIPROT
DB: UniProtKB
  • Identity: 50.4
  • Coverage: 228.0
  • Bit_score: 221
  • Evalue 1.60e-54
integral membrane protein similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 242.0
  • Bit_score: 220
  • Evalue 5.50e-55

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Taxonomy

Geobacter sulfurreducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
GTGCTTCGGCAGATCGGCGTGGCCATCGCGCCGGTGCTGGGGGCGCTGGGGGTGGGCGGCCTGGCCGTGGCGCTGGCGCTGCAAAACACGCTCTCGAACATCTTCGCGGGCCTCTACCTGATCGCCAGCCGCACCATCCGCCCCGGCCACTACGTGCGGCTCGACAGCGGCGAGGAAGGCTACATCACCGACATCTCGTGGCGCTCCGCCACGGTGCGCACCATCGAAGACAATGCCGTGGTGGTGCCCAACGAAAAGCTCGCTTCCAGCATCGTGACGGATTTCTACCTGCCGCAGGAGACGATGCAGGTGCGCGTCTCCGTCGGCGTCGACTACGACAGCGATCCCGAGCACGTCGAAGACGTCACGCTGGAGGTCGCCCGCGAGGTCATGCGCGAGATGACCGAAACCGAAACCGCCGTCGCCCCCGGTCGCTACGACCGTCCCGGCTCGAGCGCGCCGGCGGCGACGGACCTGCCGGAGCCGAAGCTCTTCTTCCACACCTTCGGCGAGTTCAGCCTCAACCTGATCGTCTTTTTGCGCGTGGACGAGTTTTTCGACCAGTACCGCCTGCGCCACCTCTTCATGAAACGCCTCATTGCCCGATACGAGGAAGAAGACATTCGCATTCCCTTCCCCATCCGCGAGTTCGAGATGGAACTCTCGGGCAACACCGACCGCGGCCCCGGCCGCCTCGCCCGCCCCGAATTCGAAGAAGAAGCCCCCACCGACAGCGACGCCCTGTCTTGA
PROTEIN sequence
Length: 250
VLRQIGVAIAPVLGALGVGGLAVALALQNTLSNIFAGLYLIASRTIRPGHYVRLDSGEEGYITDISWRSATVRTIEDNAVVVPNEKLASSIVTDFYLPQETMQVRVSVGVDYDSDPEHVEDVTLEVAREVMREMTETETAVAPGRYDRPGSSAPAATDLPEPKLFFHTFGEFSLNLIVFLRVDEFFDQYRLRHLFMKRLIARYEEEDIRIPFPIREFEMELSGNTDRGPGRLARPEFEEEAPTDSDALS*