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sw_4_scaffold_310

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_310_1
unknown

Not on your lists

comp(1..78)
DNA (78bp) protein (26aa)

This feature has no annotations

sw_4_scaffold_310_2
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62..313)
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B5AA25
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
hypothetical protein
sw_4_scaffold_310_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(350..2044)
DNA (1695bp) protein (565aa)
hypothetical protein; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] id=24659391 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
DNA polymerase III epsilon subunit {ECO:0000313|EMBL:CBH24554.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salini
sw_4_scaffold_310_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2172..3638)
DNA (1467bp) protein (489aa)
Alkaline phosphatase {ECO:0000313|EMBL:ACY48131.1}; EC=3.1.3.1 {ECO:0000313|EMBL:ACY48131.1};; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Alkaline phosphatase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MI23_RHOM4
alkaline phosphatase
sw_4_scaffold_310_5
Jannaschia aquimarina, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3765..4145)
DNA (381bp) protein (127aa)
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00464}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00464};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF_00464};; EC=4.1.1.50 {ECO:0000
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003679315
S-adenosylmethionine (SAM) decarboxylase proenzyme
sw_4_scaffold_310_6
Dokdonia donghaensis, Dokdonia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4187..4900)
DNA (714bp) protein (238aa)
Phage shock protein A, PspA n=1 Tax=Krokinobacter sp. (strain 4H-3-7-5) RepID=F4AYG9_KROS4
Phage-shock protein {ECO:0000313|EMBL:KGO06254.1}; TaxID=1300343 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Dokdonia.;" source="Dokdonia donghaensis DSW-1.;
phage shock protein A, PspA
sw_4_scaffold_310_7
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(4995..5465)
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QY72_CHLT3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF15038.1}; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton thalassium (strain ATC
sw_4_scaffold_310_8
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5558..5965)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GBP1_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM76747.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesio
DnaJ domain-containing protein
sw_4_scaffold_310_9
Pseudanabaena sp. PCC 7367, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(6077..7150)
DNA (1074bp) protein (358aa)
Ion transport 2 domain protein n=1 Tax=Pseudanabaena sp. PCC 7367 RepID=K9SG87_9CYAN
Ion transport 2 domain-containing protein
Ion transport 2 domain protein {ECO:0000313|EMBL:AFY69213.1}; Flags: Precursor;; TaxID=82654 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Pseudanabaena.;" source="Pseudana
sw_4_scaffold_310_10
Desulfarculus sp. SPR, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7328..7966)
DNA (639bp) protein (213aa)
Putative uncharacterized protein n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QYM3_CHLT3
Contig_19, whole genome shotgun sequence {ECO:0000313|EMBL:KIX14429.1}; TaxID=1429043 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source
hypothetical protein
sw_4_scaffold_310_11
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8050..9600)
DNA (1551bp) protein (517aa)
Spermidine synthase n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6VSK8_9ALTE
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=62
spermine synthase
sw_4_scaffold_310_12
Vibrio sp. B183, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9849..10085)
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-C09 RepID=UPI0003723597
Uncharacterized protein {ECO:0000313|EMBL:KFI12948.1}; TaxID=1526762 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sp. B183.;"
sw_4_scaffold_310_13
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10158..10709)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6WQ11_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:ENO13142.1}; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter nanh
sw_4_scaffold_310_14
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10796..11647)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6WWF7_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:ENO13143.1}; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter nanh
hypothetical protein
sw_4_scaffold_310_15
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13229..13978
DNA (750bp) protein (250aa)
mechanosensitive ion channel protein MscS n=1 Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B500D8
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:AJY68579.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Ge
integral membrane protein
sw_4_scaffold_310_16
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

14043..14486
DNA (444bp) protein (148aa)
S23 ribosomal protein Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
hypothetical protein id=14425926 bin=bin1_lowGC species=Dyadobacter beijingensis genus=Dyadobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
sw_4_scaffold_310_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14642..15352
DNA (711bp) protein (237aa)
Malate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00487}; EC=1.1.1.37 {ECO:0000255|HAMAP-Rule:MF_00487};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
Malate dehydrogenase n=2 Tax=Salinibacter ruber RepID=MDH_SALRD
mdh; malate dehydrogenase
Displaying 17 items

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