ggKbase home page

sw_4_scaffold_323_16

Organism: SW_4_UNK

megabin RP 51 / 55 MC: 43 BSCG 44 / 51 MC: 35 ASCG 38 / 38 MC: 38
Location: comp(11973..12968)

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halofer similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 331.0
  • Bit_score: 622
  • Evalue 4.10e-175
CRISPR-associated endonuclease Cas1 n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LWK7_HALLT similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 331.0
  • Bit_score: 622
  • Evalue 3.00e-175
CRISPR-associated protein Cas1 similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 331.0
  • Bit_score: 622
  • Evalue 8.30e-176

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halorubrum lacusprofundi → Halorubrum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 996
ATGACCAAAGACAACCACCACGTGTTCACCGACGGCGAGCTTTCGCGTAGCGAGGATACACTCAGAATCGACACACTTGATGGGGAGATGGAACATTTACCGGTCGAGAGTATTGATACGCTGTATCTACACGGGCAGATCGATTTCAACACGCGAGCACTCGGCCTGCTTAACGACCACGGTGTTCCTGCACACGTATTCGGGTGGAAAGACTACTACAAAGGATCGTATCTCCCGAAACGGAGTCACATCTCAGGAAACACGGTCGTTGAGCAGGTCCGAGCCTACGACGATGCTGATCAGCGCCTTGCGATTGCCACGTCAATAATCGAAGCGAGTATCCACAATATGCGGGCGAATCTCGTCTACTACAACGCACGCGACTGTTCGTTTGAGGAGGAAATTGATCAGCTCGAATCGCTCAAGACGGAAGCAGGTGCGGCTGACAGCGTTGAAACGCTCCGCGGGACTGAGGCAACGGCCCGGAAAACTTACTATTCGTGTTTCGATGAGATTCTGCGGGAGCCGTTTTCGCTCAACCGACGAGAGTATAATCCGCCAACCAACGAGACGAACGCACTCATCTCGTTTCTCAATTCAATGGTTTACACGGCCTGTGTCTCAGCGATTCGCAAAACAGCACTTGATCCGACAGTTGGATTTATGCACGAACCGGGAGATCGACGATTTACACTCTCACTCGATATTGCCGACATATACAAACCGATTCTCGCAGACCGCGTGTTATTCCGTCTCATCAACCGTCAACAGATCAGCCTTGATGAGTTCGAATCAGATCTCGATGGCTGTCTACTCACTGAAGATGGTCGCCTGACAGTGCTGGAGGAGTATGAAGAAACGCTCGACAGGACGGTCGAACACCCTCGGCTGAAACGAAAGGTAAGCTACAAGACGCTCGTACAGACGGACGTATACAGTTTGAAGAAACACATCCTGACCGACGAGCCGTATCGTCCAACTGAGCGGTGGTGGTAA
PROTEIN sequence
Length: 332
MTKDNHHVFTDGELSRSEDTLRIDTLDGEMEHLPVESIDTLYLHGQIDFNTRALGLLNDHGVPAHVFGWKDYYKGSYLPKRSHISGNTVVEQVRAYDDADQRLAIATSIIEASIHNMRANLVYYNARDCSFEEEIDQLESLKTEAGAADSVETLRGTEATARKTYYSCFDEILREPFSLNRREYNPPTNETNALISFLNSMVYTACVSAIRKTALDPTVGFMHEPGDRRFTLSLDIADIYKPILADRVLFRLINRQQISLDEFESDLDGCLLTEDGRLTVLEEYEETLDRTVEHPRLKRKVSYKTLVQTDVYSLKKHILTDEPYRPTERWW*