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sw_4_scaffold_323

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_323_1
unknown

Not on your lists

2..106
DNA (105bp) protein (35aa)

This feature has no annotations

sw_4_scaffold_323_2
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(284..1627)
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YTR3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY76882.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
hypothetical protein
sw_4_scaffold_323_3
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1751..3367)
DNA (1617bp) protein (539aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Natronorubrum tibetense GA33 RepID=L9W983_9EURY
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:ELY45841.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Na
type I phosphodiesterase/nucleotide pyrophosphatase
sw_4_scaffold_323_4
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3372..3767)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J357_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15164.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_4_scaffold_323_5
unknown

Not on your lists

4028..4309
DNA (282bp) protein (94aa)

This feature has no annotations

sw_4_scaffold_323_6
unknown

Not on your lists

4937..5593
DNA (657bp) protein (219aa)

This feature has no annotations

sw_4_scaffold_323_7
unknown

Not on your lists

5590..6522
DNA (933bp) protein (311aa)

This feature has no annotations

sw_4_scaffold_323_8
unknown

Not on your lists

6570..7238
DNA (669bp) protein (223aa)

This feature has no annotations

sw_4_scaffold_323_9
uncultivated_archaeon_J07ABHX67, HalobacterialesCP, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7269..8303
DNA (1035bp) protein (345aa)
id=24650872 bin=uncultivated_archaeon_J07ABHX67 tax=uncultivated_archaeon_J07ABHX67
id=24650872 bin=uncultivated_archaeon_J07ABHX67 tax=uncultivated_archaeon_J07ABHX67
sw_4_scaffold_323_10
unknown

Not on your lists

8531..9574
DNA (1044bp) protein (348aa)

This feature has no annotations

sw_4_scaffold_323_11
unknown

Not on your lists

9564..10130
DNA (567bp) protein (189aa)

This feature has no annotations

sw_4_scaffold_323_12
uncultivated_archaeon_J07ABHX67, HalobacterialesCP, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10147..10701
DNA (555bp) protein (185aa)
id=24650882 bin=uncultivated_archaeon_J07ABHX67 tax=uncultivated_archaeon_J07ABHX67
id=24650882 bin=uncultivated_archaeon_J07ABHX67 tax=uncultivated_archaeon_J07ABHX67
sw_4_scaffold_323_13
unknown

Not on your lists

comp(11116..11310)
DNA (195bp) protein (65aa)

This feature has no annotations

sw_4_scaffold_323_14
unknown

Not on your lists

comp(11449..11571)
DNA (123bp) protein (41aa)

This feature has no annotations

sw_4_scaffold_323_15
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11711..11971)
DNA (261bp) protein (87aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Hal
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LWK6_HALLT
CRISPR-associated protein Cas2
sw_4_scaffold_323_16
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11973..12968)
DNA (996bp) protein (332aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halofer
CRISPR-associated endonuclease Cas1 n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LWK7_HALLT
CRISPR-associated protein Cas1
sw_4_scaffold_323_17
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12971..13540)
DNA (570bp) protein (190aa)
CRISPR-associated protein Cas4 n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LWK8_HALLT
CRISPR-associated protein Cas4
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:ACM58849.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi
sw_4_scaffold_323_18
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13629..16445)
DNA (2817bp) protein (939aa)
Putative helicase n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LWK9_HALLT
Putative helicase {ECO:0000313|EMBL:ACM58850.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain ATCC
putative helicase rbh
sw_4_scaffold_323_19
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16466..17263)
DNA (798bp) protein (266aa)
CRISPR-associated protein Cas5, Hmari subtype n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LWL0_HALLT
CRISPR-associated protein Cas5, Hmari subtype
CRISPR-associated protein Cas5, Hmari subtype {ECO:0000313|EMBL:ACM58851.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum
sw_4_scaffold_323_20
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17288..18310)
DNA (1023bp) protein (341aa)
CRISPR-associated protein, Csh2 family n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LWL1_HALLT
CRISPR-associated protein, Csh2 family rbh
CRISPR-associated protein, Csh2 family {ECO:0000313|EMBL:ACM58852.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusp
sw_4_scaffold_323_21
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18334..20487)
DNA (2154bp) protein (718aa)
CRISPR-associated protein, Csh1 family n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LWL2_HALLT
CRISPR-associated protein, Csh1 family {ECO:0000313|EMBL:ACM58853.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusp
CRISPR-associated protein, Csh1 family
sw_4_scaffold_323_22
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20484..21278)
DNA (795bp) protein (265aa)
CRISPR-associated endoribonuclease Cas6 n=2 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AM89_NATGS
CRISPR associated protein Cas6 {ECO:0000313|EMBL:CQR53158.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
CRISPR-associated endoribonuclease Cas6
sw_4_scaffold_323_23
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21381..21566)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1PL25_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG94377.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
sw_4_scaffold_323_24
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(21735..22634)
DNA (900bp) protein (300aa)
Uncharacterized protein n=3 Tax=Bordetella pertussis RepID=V8VIP2_BORPT
Uncharacterized protein Tax=RBG_13_Chloroflexi_68_17_curated
sw_4_scaffold_323_25
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22819..23604
DNA (786bp) protein (262aa)
DNA mismatch repair protein MutL n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU24_NATPD
mutL; DNA mismatch repair protein MutL
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas
sw_4_scaffold_323_26
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23660..24571
DNA (912bp) protein (304aa)
PfkB domain protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX34_9EURY
PfkB domain protein {ECO:0000313|EMBL:EMA49883.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989
sugar kinase
sw_4_scaffold_323_27
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24573..25160)
DNA (588bp) protein (196aa)
TetR family transcription regulator n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU25_NATPD
transcription regulator
TetR family transcription regulator {ECO:0000313|EMBL:CAI48358.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas p
sw_4_scaffold_323_28
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25301..26464
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D7V7_HALXS
Uncharacterized protein {ECO:0000313|EMBL:KDE59500.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
hypothetical protein
sw_4_scaffold_323_29
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26501..27049
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D6Y5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29914.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
sw_4_scaffold_323_30
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27786..28736
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI00037AD2CF
Uncharacterized protein {ECO:0000313|EMBL:ELZ47801.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
hypothetical protein
Displaying 30 items

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