ggKbase home page

sw_4_scaffold_642_16

Organism: SW_4_UNK

megabin RP 51 / 55 MC: 43 BSCG 44 / 51 MC: 35 ASCG 38 / 38 MC: 38
Location: comp(16637..19747)

Top 3 Functional Annotations

Value Algorithm Source
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Salisaeta longa RepID=UPI0003B77068 similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 999.99
  • Bit_score: 1192
  • Evalue 0.0
TonB-dependent receptor plug {ECO:0000313|EMBL:CCH51658.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.3
  • Coverage: 999.99
  • Bit_score: 975
  • Evalue 4.60e-281
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 999.99
  • Bit_score: 951
  • Evalue 1.90e-274

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Fibrisoma limi → Fibrisoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3111
ATGAGAAAACTAACAAAATCGATCGCCTGTAGTGGACTGCTGCTGTTCCTACTCGCCCCCGGGCTCAGCCAGGCCCAGGAAATTACCGTTACCGGAACGGTGATGGATGCGAGCACGGACACGCCCTTGCCGGGCGCCACCGTGAGCTTGCAGGGCACCACCCGCGGTACCGCTACGAGCTCGAACGGAAACTATGAGTTGGAGGCGCCTTCCGACGGCACTCTCGTGTTCTCATTTGTCGGATATGCCACGCAAGAGATAAACATCGACGGGCGCTCCACCATCGACGTGGCCTTGGCGCCTGCAGAGCAGCAGCTCGACGAGGTGGTCGTCGTGGGGTTTGGACAACGGGAGGAACAATCCGTAACAGGGAGCATCTCGCAGGTCTCCTCCAGGGAAATTGAGGCCACCGAGGTTAGCAGCTTCGAGGAAGTCCTTCAGGGCCGCACCCCCGGCGTCCATATCACAAACTCCAGCGGAAAGTTGGGACAGGGCATCCGGGTCCGCATCCGCGGGAATTCGTCCGTCACGGGCGACAACCAACCGCTCTTCGTTGTGGACGGCGTTCCTCTCAACGACCAGAGCCTGTCTGACAACGGTGCGCCCACAAACCCGCTGTCCCAGCTCAACGTCAACGACATCGAGTCGATCGAGGTGCTGAAGGATGCCTCCGCCACAGCCATCTACGGGGCTCGGGCCTCGAATGGCGTTGTTCTCATTTCGACCAAGCAGGGAACGGAAGGCGGCTCGCAATTTTCGTTCAGTCTGAAGCGCGGCTGGCGAGGCCCGACCAACAAGGTCGACATGATGAACGCGAGCCAGTATGTCGACTACTACCTGGAAGCGGCCAAAAACAGCCCCTTTCCTTGGGCGGAATCCTTTATACGTAGCTCCTTCAATGGACTCGCCGCCGGGACCGACTGGACGCAGGCCATCGGGGAAAATACCAATCCGGTCGTCGACACTGACTGGACCGACAAGCCGTTTGCGAGCAACCCCACCAGCTTCGAGGCCAGTCTGAGCGCCCGGGGCGGCGACGAGACGACCACGTTCTACATCTCGGGCCTCTACAGCCAGACCGACGGCATCCTATTCAAGAACTCCTACGACAAGATCTCCGGCCGGGCGAACGTGACCCACTCGTTCTCCGACCAGTTTGAGGTGGGCACGCGCCTGAACCTGAACCGCGTGATCAACCAGCGTGTCCCGAACGACAATGCGTTTGCAACCCCGGTCCAGTTGATTGCCCAAGCTCCCATCTCCCCGGTGTTCGAGCCCCAAACGGAAGGCATCCCAACCAACGATCAGGGCCTTCTCACACAGTACCAGCCTACGGACGACTACTTTAACCAGACCCTATATTTCAACAACCTGCTCTACAAAGACAACGTCCGGCACAACGTGACGACCTTCCGGACCCTCGGCAATGCCTTTGCGGAGTACGACCTGTTGAGCAGCCTCTCTCTTCGGGGCGAATTCGGTCTGGACCTCCGCACGCGAAACGCCGACCGGTACTGGAACAGCAAGGTCTTTCAGACGGTCGGGACCGACGAGGGCATTGGCCGGCAGGTGTGGGACCGAATCGTCAACTATAACGTCGATGCATTCCTCAACTATGATAACACGTTCGGGAACGTCCACAGCCTCTCCGGTACTGCTGGAATGCAGCTGCAGTCGTCCACAACGAATAGCGCCGCGGTGGAAGTGGAGAGCTTTCCGAATGACAGCTTCCAGCAGATCGACAGTGGATCGGACATCGTGGACGCGGATGGCTCGGAAACCACGTACCAGTTCCTGGCCTACTTCGGCCGTCTCAACTACAACTACGACGGACGCTACTTCCTGAAGCTCAGCGGGCGGTATGAGGGCTCTTCTCGCTTTGGACAAGAAAATCGATACGGCTTCTTCCCGGCCGCGTCCGCCGGGTGGGTCCTTACGGAAGAGTCCTTTTTCCCATCGACCGATCTGGTGAACCGCCTGAAGCTGCGCACCAGCTTCGGCGTCACCGGCAACGCAGGCATCGGCAACTTTCCCTCTCTCGGCCTCTGGGGCGCGTCCACCTACGCGGGACAGTCCGGCATCGACCCCAGCCAGACCCCGAACCCGGCCCTGCAGTGGGAGCAGACTCAGGAGGTCACCCTGGGCCTCGACTACGAACTGTTTAACAGTCGGATCACCGGCAGCATCGACGTCTACCGCAAGACCACCAACGACCTGCTGCTGGATCTCAATGTGCCGGCCACCACAGGCTTCTTAAGCCAAACGCGCAATGTGGGAGAGGTGAAGAACCGGGGACTCGAATTTCTAATTGAGACCCGGAACCTCACCGGCAACTTTCGCTGGTCCTCCAACTTCAACGTCTCGTTCAACCGAAACGAGGTGACCGACCTGAACGGTCAGGTGCTCACGGGAGGATTCGTCAATCAGGCGCGCAAGGGCGAGCCACTCGGCGTCTTCTACGCGCTCGAATATGCCGGCGTGGATCCCCAGAACGGAGACGCGCTCTACTACGTCAATGAGAAAAATGAGGACGGCGAAATCGTCAATTCGGGGGCGACGACCAATGACCCGAATGCGGCCAACCGTGTCGTCATTGGGAGCCCGCAGCCCGACTTTACGGGTGGATTCGGCAATACACTGTCGTACAAAGGGGTGCAACTGCGCTTCCTGTTCACATTCGACCAGGGCAGTCAGATTTTTGACGGCGGCGGCGAGTACAAAACCGCCAACGGCCGGTTCCGCGACAACCAACACGTGAGCCAGTTGGACGCCTGGGAAGAGCCCGGGGATCAGACGGACGTGCCGGAGCCCCGCCTCTTCGAGAACAACGGAGCGGCGGACTCCGACCGGTACCTCTACGACGCGTCGTACATCCGGCTCAAGAACGTCAACCTATCCTACAACTTGCCGACGCGACTGATGCAGAGCTTGTCGGTCAGCAGTGCCCGAATCTTTGTGACGGGTCAAAACCTCCTCACGTTTACCGACTACCGGTGGTGGGATCCGGAGGCGAACGCTGATGCCTTCTCCGGCAATCTCGGCTTCGGAAACGAGTTCTACACTGCCCCTCAGACCCGGTCAGTCACCGGCGGCATCCAGCTCTCATTCTAA
PROTEIN sequence
Length: 1037
MRKLTKSIACSGLLLFLLAPGLSQAQEITVTGTVMDASTDTPLPGATVSLQGTTRGTATSSNGNYELEAPSDGTLVFSFVGYATQEINIDGRSTIDVALAPAEQQLDEVVVVGFGQREEQSVTGSISQVSSREIEATEVSSFEEVLQGRTPGVHITNSSGKLGQGIRVRIRGNSSVTGDNQPLFVVDGVPLNDQSLSDNGAPTNPLSQLNVNDIESIEVLKDASATAIYGARASNGVVLISTKQGTEGGSQFSFSLKRGWRGPTNKVDMMNASQYVDYYLEAAKNSPFPWAESFIRSSFNGLAAGTDWTQAIGENTNPVVDTDWTDKPFASNPTSFEASLSARGGDETTTFYISGLYSQTDGILFKNSYDKISGRANVTHSFSDQFEVGTRLNLNRVINQRVPNDNAFATPVQLIAQAPISPVFEPQTEGIPTNDQGLLTQYQPTDDYFNQTLYFNNLLYKDNVRHNVTTFRTLGNAFAEYDLLSSLSLRGEFGLDLRTRNADRYWNSKVFQTVGTDEGIGRQVWDRIVNYNVDAFLNYDNTFGNVHSLSGTAGMQLQSSTTNSAAVEVESFPNDSFQQIDSGSDIVDADGSETTYQFLAYFGRLNYNYDGRYFLKLSGRYEGSSRFGQENRYGFFPAASAGWVLTEESFFPSTDLVNRLKLRTSFGVTGNAGIGNFPSLGLWGASTYAGQSGIDPSQTPNPALQWEQTQEVTLGLDYELFNSRITGSIDVYRKTTNDLLLDLNVPATTGFLSQTRNVGEVKNRGLEFLIETRNLTGNFRWSSNFNVSFNRNEVTDLNGQVLTGGFVNQARKGEPLGVFYALEYAGVDPQNGDALYYVNEKNEDGEIVNSGATTNDPNAANRVVIGSPQPDFTGGFGNTLSYKGVQLRFLFTFDQGSQIFDGGGEYKTANGRFRDNQHVSQLDAWEEPGDQTDVPEPRLFENNGAADSDRYLYDASYIRLKNVNLSYNLPTRLMQSLSVSSARIFVTGQNLLTFTDYRWWDPEANADAFSGNLGFGNEFYTAPQTRSVTGGIQLSF*