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sw_4_scaffold_642

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_642_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1..174)
DNA (174bp) protein (58aa)
ggt; gamma-glutamyltransferase; K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2] id=24658608 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Gamma-glutamyltransferase {ECO:0000313|EMBL:ABC46173.1}; EC=2.3.2.2 {ECO:0000313|EMBL:ABC46173.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermace
ggt; gamma-glutamyltransferase
sw_4_scaffold_642_2
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(377..883)
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G3K4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KHD07755.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
hypothetical protein
sw_4_scaffold_642_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1040..1678)
DNA (639bp) protein (213aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZ74_SALRD
N-acetylmuramoyl-L-alanine amidase
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ABC44556.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salini
sw_4_scaffold_642_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1699..2775)
DNA (1077bp) protein (359aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermace
Thioredoxin reductase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZ75_SALRD
trxB; thioredoxin-disulfide reductase
sw_4_scaffold_642_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2926..3270)
DNA (345bp) protein (115aa)
Thioredoxin n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCP0_SALRM
trxA; Thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077, ECO:0000313|EMBL:CBH25795.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source
sw_4_scaffold_642_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3443..5632)
DNA (2190bp) protein (730aa)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420, ECO:0000
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCN9_SALRM
purL; phosphoribosylformylglycinamidine synthase
sw_4_scaffold_642_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5867..6106)
DNA (240bp) protein (80aa)
hypothetical protein
hypothetical protein id=24658603 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25793.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_642_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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6149..7435
DNA (1287bp) protein (429aa)
Nucleoside:H symporter n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFB0_RHOMR
nucleoside:H symporter
Nucleoside:H symporter {ECO:0000313|EMBL:AEN73631.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marin
sw_4_scaffold_642_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7544..8599
DNA (1056bp) protein (352aa)
3-beta hydroxysteroid dehydrogenase/isomerase family protein
3-beta hydroxysteroid dehydrogenase/isomerase family protein id=24658601 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
3-beta hydroxysteroid dehydrogenase/isomerase family {ECO:0000313|EMBL:ABC43729.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter
sw_4_scaffold_642_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8701..9780
DNA (1080bp) protein (360aa)
Asparaginase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCN5_SALRM
asparaginase
Asparaginase {ECO:0000313|EMBL:CBH25790.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M
sw_4_scaffold_642_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9789..10367)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCN4_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25789.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_4_scaffold_642_12
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10381..10761)
DNA (381bp) protein (127aa)
S23 ribosomal protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
Putative uncharacterized protein id=3174732 bin=GWC2_Deltaproteobacteria_42_51 species=Nodularia spumigena genus=Nodularia taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
S23 ribosomal protein
sw_4_scaffold_642_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10816..12033)
DNA (1218bp) protein (406aa)
atoC; C4-dicarboxylate transport transcriptional regulatory protein
atoC; C4-dicarboxylate transport transcriptional regulatory protein id=24658598 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
C4-dicarboxylate transport transcriptional regulatory protein {ECO:0000313|EMBL:CBH25788.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sal
sw_4_scaffold_642_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12261..14990)
DNA (2730bp) protein (910aa)
Prolyl oligopeptidase family protein, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZ84_SALRD
prolyl oligopeptidase family protein
Prolyl oligopeptidase family protein, putative {ECO:0000313|EMBL:ABC45643.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" so
sw_4_scaffold_642_15
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15195..16580)
DNA (1386bp) protein (462aa)
carbohydrate-binding protein SusD n=1 Tax=Salisaeta longa RepID=UPI0003B3AD56
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ98730.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
sw_4_scaffold_642_16
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16637..19747)
DNA (3111bp) protein (1037aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Salisaeta longa RepID=UPI0003B77068
TonB-dependent receptor plug {ECO:0000313|EMBL:CCH51658.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
TonB-dependent receptor plug
sw_4_scaffold_642_17
unknown

Not on your lists

comp(20060..20218)
DNA (159bp) protein (53aa)

This feature has no annotations

Displaying 17 items

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