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sw_4_scaffold_100

Search features with annotation key words

Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_100_1
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

2..226
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI0003455E2F
Uncharacterized protein {ECO:0000313|EMBL:KIF23655.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
hypothetical protein
sw_4_scaffold_100_2
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

405..692
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Rivularia sp. PCC 7116 RepID=K9R8H9_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY54225.1}; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
sw_4_scaffold_100_3
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

970..1446
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI000347A19F
Uncharacterized protein {ECO:0000313|EMBL:KIE08691.1}; TaxID=1479485 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
transmembrane sensor domain-containing protein
sw_4_scaffold_100_4
unknown

Not on your lists

comp(1416..1562)
DNA (147bp) protein (49aa)

This feature has no annotations

sw_4_scaffold_100_5
Trichodesmium erythraeum, Trichodesmium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2047..2259
DNA (213bp) protein (71aa)
Prolyl aminopeptidase {ECO:0000313|EMBL:ABG52900.1}; EC=3.4.11.5 {ECO:0000313|EMBL:ABG52900.1};; TaxID=203124 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Trichodesmium.;"
sw_4_scaffold_100_6
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

2542..3684
DNA (1143bp) protein (381aa)
Oxidoreductase domain protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TXD8_9CYAN
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AFY86659.1}; Flags: Precursor;; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis
sw_4_scaffold_100_7
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4010..4849
DNA (840bp) protein (280aa)
Putative aminopeptidase n=1 Tax=Moorea producens 3L RepID=F4XT78_9CYAN
Peptidase M28 {ECO:0000313|EMBL:KJH70538.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
aminopeptidase
sw_4_scaffold_100_8
Nostoc sp. PCC 7120, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(4972..6201)
DNA (1230bp) protein (410aa)
All5322 protein n=1 Tax=Nostoc sp. (strain PCC 7120 / UTEX 2576) RepID=Q8YLH6_NOSS1
hypothetical protein
All5322 protein {ECO:0000313|EMBL:BAB77021.1}; TaxID=103690 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain PCC 7120 / UTEX 2576).;"
sw_4_scaffold_100_9
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(6715..7326)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VVI2_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ11180.1}; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333.;"
sw_4_scaffold_100_10
Bacillus subtilis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7524..7943)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Bacillus subtilis BEST7613 RepID=L8APR2_BACIU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM53552.1}; TaxID=1204343 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus subtilis BEST7613.;"
sw_4_scaffold_100_11
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

8222..8800
DNA (579bp) protein (193aa)
Putative HD superfamily hydrolase of NAD metabolism n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T6K6_9CYAN
putative HD superfamily hydrolase of NAD metabolism
Putative HD superfamily hydrolase of NAD metabolism {ECO:0000313|EMBL:AFY78160.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_4_scaffold_100_12
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

8909..9367
DNA (459bp) protein (153aa)
Ribosomal silencing factor RsfS n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YCI5_HALP7
iojap family protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; Flags: Precursor;; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;
sw_4_scaffold_100_13
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

9388..9897
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=filamentous cyanobacterium ESFC-1 RepID=UPI0003703B3A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY78158.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_4_scaffold_100_14
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

9956..10909
DNA (954bp) protein (318aa)
L-asparaginase II n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UHH0_CYAP2
L-asparaginase II
L-asparaginase II {ECO:0000313|EMBL:ADN12111.1}; TaxID=497965 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7822).;"
sw_4_scaffold_100_trna_1
unknown

Not on your lists

10978..11051
DNA (74bp)
transferRNA
sw_4_scaffold_100_15
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11011..11400)
DNA (390bp) protein (130aa)
Putative transposase n=1 Tax=Microcystis aeruginosa (strain NIES-843) RepID=B0JG54_MICAN
transposase
Genome sequencing data, contig C316 {ECO:0000313|EMBL:CAO87412.1}; TaxID=267872 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PC
sw_4_scaffold_100_16
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11706..13604)
DNA (1899bp) protein (633aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YY52_DACSA
glucosamine--fructose-6-phosphate aminotransferase
sw_4_scaffold_100_17
Arthrospira platensis, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(13887..14132)
DNA (246bp) protein (82aa)
Photosystem I iron-sulfur center {ECO:0000256|HAMAP-Rule:MF_01303}; EC=1.97.1.12 {ECO:0000256|HAMAP-Rule:MF_01303};; 9 kDa polypeptide {ECO:0000256|HAMAP-Rule:MF_01303}; PSI-C {ECO:0000256|HAMAP-Rule:
Photosystem I iron-sulfur center n=9 Tax=Oscillatoriophycideae RepID=PSAC_TRIEI
photosystem I iron-sulfur protein PsaC
sw_4_scaffold_100_18
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

14488..15000
DNA (513bp) protein (171aa)
Heat shock protein Hsp20 n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XLM1_9CHRO
heat shock protein Hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:AFZ32979.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
sw_4_scaffold_100_19
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(15043..15924)
DNA (882bp) protein (294aa)
Probable aspartoacylase {ECO:0000256|HAMAP-Rule:MF_00704}; EC=3.5.1.15 {ECO:0000256|HAMAP-Rule:MF_00704};; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea
aspartoacylase (EC:3.5.1.15)
Probable aspartoacylase n=1 Tax=Moorea producens 3L RepID=F4XXZ2_9CYAN
sw_4_scaffold_100_20
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

16100..16459
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T1F2_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY75991.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_4_scaffold_100_21
unknown

Not on your lists

16726..16998
DNA (273bp) protein (91aa)

This feature has no annotations

sw_4_scaffold_100_22
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(16978..17985)
DNA (1008bp) protein (336aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=118163 species="B
Methionyl-tRNA formyltransferase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T3K1_9CYAN
methionyl-tRNA formyltransferase
sw_4_scaffold_100_23
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(18115..18636)
DNA (522bp) protein (174aa)
Putative uncharacterized protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VRC1_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EDX75529.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthon
hypothetical protein
sw_4_scaffold_100_24
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

19036..20652
DNA (1617bp) protein (539aa)
Small G protein, GTPase SAR1 n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T6J8_9CYAN
small G protein, GTPase SAR1
Small G protein, GTPase SAR1 {ECO:0000313|EMBL:AFY77741.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_4_scaffold_100_25
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(20733..22205)
DNA (1473bp) protein (491aa)
Aldehyde dehydrogenase (NAD) family protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VI00_9CYAN
Aldehyde dehydrogenase (NAD) family protein {ECO:0000313|EMBL:EDX78774.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofascic
aldehyde dehydrogenase
Displaying 26 items

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