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sw_4_scaffold_20

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_20_1
unknown

Not on your lists

1..72
DNA (72bp) protein (24aa)

This feature has no annotations

sw_4_scaffold_20_2
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

873..2003
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WEL7_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ17972.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
sw_4_scaffold_20_3
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

2014..2652
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T4F0_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY77375.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_4_scaffold_20_4
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2652..2897
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YF03_HALP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ45062.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (strain
sw_4_scaffold_20_5
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

2929..3363
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9Y1C3_STAC7
protein of unknown function UPF0047
Uncharacterized protein {ECO:0000313|EMBL:AFZ37772.1}; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437).;"
sw_4_scaffold_20_6
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

3523..4773
DNA (1251bp) protein (417aa)
Pentulose/hexulose kinase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T1Y7_9CYAN
pentulose/hexulose kinase
Pentulose/hexulose kinase {ECO:0000313|EMBL:AFY76049.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_4_scaffold_20_7
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5012..5281
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y2V1_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ28496.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mu
hypothetical protein
sw_4_scaffold_20_8
unknown

Not on your lists

5259..5468
DNA (210bp) protein (70aa)

This feature has no annotations

sw_4_scaffold_20_9
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5446..6183)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WJX1_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ20054.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
sw_4_scaffold_20_10
Gloeocapsa sp. PCC 73106, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

6529..7443
DNA (915bp) protein (305aa)
Branched-chain amino acid aminotransferase, group I n=1 Tax=Gloeocapsa sp. PCC 73106 RepID=L8LP55_9CHRO
Branched-chain amino acid aminotransferase, group I {ECO:0000313|EMBL:ELR99378.1}; TaxID=102232 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa
branched-chain amino acid aminotransferase
sw_4_scaffold_20_11
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7507..8397)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=filamentous cyanobacterium ESFC-1 RepID=UPI00037719F1
Uncharacterized protein {ECO:0000313|EMBL:EMS40965.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
transport protein, YfdC-like protein
sw_4_scaffold_20_12
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8735..11053)
DNA (2319bp) protein (773aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halot
ATP-dependent DNA helicase, Rep family n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YAB6_HALP7
ATP-dependent DNA helicase, Rep family
sw_4_scaffold_20_13
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11059..12921)
DNA (1863bp) protein (621aa)
Heat domain-containing protein n=1 Tax=Moorea producens 3L RepID=F4XTH8_9CYAN
Heat domain-containing protein {ECO:0000313|EMBL:EGJ32114.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
HEAT repeat-containing PBS lyase
sw_4_scaffold_20_14
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

13322..14002
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Spirulina subsalsa RepID=UPI0003601490
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AFY76806.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_4_scaffold_20_15
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

14078..14569
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WI13_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ20045.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
sw_4_scaffold_20_16
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(14793..15050)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T479_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY76804.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_4_scaffold_20_17
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(15191..15601)
DNA (411bp) protein (137aa)
Uridine kinase n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YS18_DACSA
uridine kinase
Uridine kinase {ECO:0000313|EMBL:AFZ48903.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina PCC 8305.;"
sw_4_scaffold_20_18
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


16407..18977
DNA (2571bp) protein (857aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=65093 species="Bacteria; Cyanobac
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YCL0_HALP7
sw_4_scaffold_20_19
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(19669..21516)
DNA (1848bp) protein (616aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; Flags: Precursor;; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatorio
membrane protease FtsH catalytic subunit (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YFR2_HALP7
sw_4_scaffold_20_20
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

22068..22373
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0002DBBD90
Thymidylate synthase {ECO:0000313|EMBL:KIJ85166.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
hypothetical protein
sw_4_scaffold_20_21
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(22488..22898)
DNA (411bp) protein (137aa)
SCP-like extracellular n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XR69_STAC7
SCP-like extracellular
SCP-like extracellular {ECO:0000313|EMBL:AFZ34162.1}; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437).;"
sw_4_scaffold_20_22
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

23138..24385
DNA (1248bp) protein (416aa)
Arabinose efflux permease family protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WKX6_9CYAN
arabinose efflux permease family protein
Arabinose efflux permease family protein {ECO:0000313|EMBL:AFZ20466.1}; Flags: Precursor;; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source
sw_4_scaffold_20_23
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

24497..25948
DNA (1452bp) protein (484aa)
ATP-dependent DNA helicase RecQ (EC:3.6.1.-)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:AFZ20769.1}; EC=3.6.1.- {ECO:0000313|EMBL:AFZ20769.1};; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microc
ATP-dependent DNA helicase RecQ n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WLW6_9CYAN
sw_4_scaffold_20_24
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

26560..27345
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XM83_9CHRO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ33176.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
sw_4_scaffold_20_25
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

27779..28090
DNA (312bp) protein (104aa)
NADP oxidoreductase coenzyme F420-dependent protein n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0C5C0_ACAM1
NADP oxidoreductase coenzyme F420-dependent protein
NADP oxidoreductase coenzyme F420-dependent protein {ECO:0000313|EMBL:ABW26360.1}; TaxID=329726 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryoc
sw_4_scaffold_20_26
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(28156..28830)
DNA (675bp) protein (225aa)
NmrA-like family protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WKQ8_9CYAN
NmrA-like family protein
NmrA-like family protein {ECO:0000313|EMBL:AFZ20773.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
sw_4_scaffold_20_27
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

28929..29504
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9W766_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ16220.1}; Flags: Precursor;; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp.
sw_4_scaffold_20_28
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(29618..30643)
DNA (1026bp) protein (342aa)
Ca2+/Na+ antiporter n=1 Tax=Rivularia sp. PCC 7116 RepID=K9RN66_9CYAN
Ca2+/Na+ antiporter
Ca2+/Na+ antiporter {ECO:0000313|EMBL:AFY58976.1}; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
sw_4_scaffold_20_29
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

30711..31298
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YDI8_HALP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ44532.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (strain
sw_4_scaffold_20_30
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

31349..32095
DNA (747bp) protein (249aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NQG8_MARHT
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEB11695.1}; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hy
Displaying items 1-30 of 35 in total

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