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sw_4_scaffold_219

Search features with annotation key words

Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_219_1
unknown

Not on your lists

comp(2..100)
DNA (99bp) protein (33aa)

This feature has no annotations

sw_4_scaffold_219_2
Trichodesmium erythraeum, Trichodesmium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(225..1001)
DNA (777bp) protein (259aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Trichodesmium erythraeum (strain IMS101) RepID=Q10XW2_TRIEI
HAD family hydrolase
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:ABG52912.1}; TaxID=203124 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Trichodesmium.;" source="Trichodesmium er
sw_4_scaffold_219_3
Lyngbya sp. PCC 8106, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1602..2372
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YU21_LYNSP
Uncharacterized protein {ECO:0000313|EMBL:EAW35508.1}; TaxID=313612 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya sp. (strain PCC 8106) (Lyngbya
hypothetical protein
sw_4_scaffold_219_4
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2496..3074
DNA (579bp) protein (193aa)
Putative low-complexity protein n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XZY1_9FIRM
Putative low-complexity protein {ECO:0000313|EMBL:EHQ92177.1}; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus you
pentapeptide repeat-containing protein
sw_4_scaffold_219_5
unknown

Not on your lists

3289..3480
DNA (192bp) protein (64aa)

This feature has no annotations

sw_4_scaffold_219_6
Lyngbya aestuarii, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

3628..3789
DNA (162bp) protein (54aa)
BON domain protein n=1 Tax=Lyngbya aestuarii BL J RepID=U7QE61_9CYAN
BON domain protein {ECO:0000313|EMBL:ERT05335.1}; TaxID=1348334 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya aestuarii BL J.;"
sw_4_scaffold_219_7
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3868..5247)
DNA (1380bp) protein (460aa)
Aldehyde dehydrogenase n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YW32_DACSA
NAD-dependent aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina PCC 8305
sw_4_scaffold_219_8
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5294..6397)
DNA (1104bp) protein (368aa)
Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9W1K7_9CYAN
response regulator receiver sensor signal transduction histidine kinase
Response regulator receiver sensor signal transduction histidine kinase {ECO:0000313|EMBL:AFZ13320.1}; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium
sw_4_scaffold_219_9
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(6771..7901)
DNA (1131bp) protein (377aa)
Geranylgeranyl reductase n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XX34_STAC7
geranylgeranyl reductase
Geranylgeranyl reductase {ECO:0000313|EMBL:AFZ36237.1}; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437).;"
sw_4_scaffold_219_10
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(8046..8594)
DNA (549bp) protein (183aa)
Ribosome-recycling factor n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9SZZ4_9CYAN
ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; Flags: Precursor;; TaxID=118163
sw_4_scaffold_219_11
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(8575..9348)
DNA (774bp) protein (258aa)
uridylate kinase (EC:2.7.4.22)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
Uridylate kinase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T0U5_9CYAN
sw_4_scaffold_219_12
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9477..10385)
DNA (909bp) protein (303aa)
Agmatinase n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UFT8_CYAP2
agmatinase
Agmatinase {ECO:0000313|EMBL:ADN14321.1}; TaxID=497965 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7822).;"
sw_4_scaffold_219_13
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

10797..11588
DNA (792bp) protein (264aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WLD1_9CYAN
alpha/beta hydrolase
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:AFZ20352.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" so
sw_4_scaffold_219_14
unknown

Not on your lists

11874..12071
DNA (198bp) protein (66aa)

This feature has no annotations

sw_4_scaffold_219_15
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

12126..13055
DNA (930bp) protein (310aa)
GGDEF domain protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VK28_9CYAN
GGDEF domain protein {ECO:0000313|EMBL:EDX77508.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes PCC
response regulator receiver modulated diguanylate cyclase
sw_4_scaffold_219_16
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(13165..14541)
DNA (1377bp) protein (459aa)
Cell envelope-related transcriptional attenuator domain family n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 PF3_9CYAN">RepID=B4VPF3_9CYAN
Cell envelope-related transcriptional attenuator domain family {ECO:0000313|EMBL:EDX75895.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;"
cell envelope-related transcriptional attenuator
Displaying 16 items

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