ggKbase home page

sw_4_scaffold_224

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_224_1
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(46..768)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YYB1_9SYNE
Uncharacterized protein {ECO:0000313|EMBL:KEI45383.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula
hypothetical protein
sw_4_scaffold_224_2
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1117..3462)
DNA (2346bp) protein (782aa)
ATPase AAA-2 domain protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YAU8_HALP7
ATPase AAA-2 domain protein {ECO:0000313|EMBL:AFZ43989.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (st
ATPase
sw_4_scaffold_224_3
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(3960..4628)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T2E1_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY76650.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_4_scaffold_224_4
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4854..5591
DNA (738bp) protein (246aa)
Response regulator receiver protein n=2 Tax=Microcystis aeruginosa RepID=I4FSR7_MICAE
Hybrid sensory kinase in two-component regulatory system with RcsB and YojN {ECO:0000313|EMBL:EPF20266.1}; TaxID=482300 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcys
response regulator receiver protein
sw_4_scaffold_224_5
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


comp(5691..6098)
DNA (408bp) protein (136aa)
50S ribosomal protein L7/L12 n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YT50_DACSA
50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina
sw_4_scaffold_224_6
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


comp(6136..6708)
DNA (573bp) protein (191aa)
50S ribosomal protein L10 n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YUT7_DACSA
50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" sour
sw_4_scaffold_224_7
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists


comp(6917..7636)
DNA (720bp) protein (240aa)
50S ribosomal protein L1 n=1 Tax=Geitlerinema sp. PCC 7105 RepID=UPI00034A3390
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318, ECO:0000313|EMBL:KIJ84434.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tol
50S ribosomal protein L1
sw_4_scaffold_224_8
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


comp(7868..8293)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YEJ7_HALP7
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halot
sw_4_scaffold_224_9
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8296..8913)
DNA (618bp) protein (206aa)
Transcription termination/antitermination protein NusG n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WBU7_9CYAN
transcription antitermination protein nusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillat
sw_4_scaffold_224_10
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8910..9149)
DNA (240bp) protein (80aa)
Protein translocase subunit SecE n=1 Tax=Cyanothece sp. (strain PCC 7424) RepID=B7KJM7_CYAP7
Preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=65393 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC
sw_4_scaffold_224_trna_1
unknown

Not on your lists

comp(9303..9375)
DNA (73bp)
transferRNA
sw_4_scaffold_224_11
Anabaena variabilis, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists


comp(9476..9838)
DNA (363bp) protein (121aa)
50S ribosomal protein L19 n=1 Tax=cyanobacterium PCC 7702 RepID=UPI00035D87AF
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000255|HAMAP-Rule:MF_00402}; TaxID=240292 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena variabilis (strain ATCC 29413 / PCC 79
sw_4_scaffold_224_12
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

10335..11171
DNA (837bp) protein (279aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran
Phosphate ABC transporter, ATP-binding protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VWQ2_9CYAN
phosphate ABC transporter ATP-binding protein
sw_4_scaffold_224_13
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11668..13431)
DNA (1764bp) protein (588aa)
Putative S-layer protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WBV3_9CYAN
S-layer protein
Putative S-layer protein {ECO:0000313|EMBL:AFZ17291.1}; Flags: Precursor;; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp
sw_4_scaffold_224_14
unknown

Not on your lists

comp(13669..13794)
DNA (126bp) protein (42aa)

This feature has no annotations

sw_4_scaffold_224_15
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(13739..14323)
DNA (585bp) protein (195aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Moorea producens 3L RepID=F4XUQ3_9CYAN
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moo
phosphate transport system regulatory protein PhoU
sw_4_scaffold_224_16
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(14515..15894)
DNA (1380bp) protein (460aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PC
Signal transduction histidine kinase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9TB78_9CYAN
signal transduction histidine kinase
sw_4_scaffold_224_17
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(15959..16711)
DNA (753bp) protein (251aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YEG9_HALP7
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AFZ45244.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halot
sw_4_scaffold_224_18
Tolypothrix sp. PCC 7601, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

16854..17600
DNA (747bp) protein (249aa)
amidase n=1 Tax=Chlorogloeopsis RepID=UPI0002F8D669
Creatininase {ECO:0000313|EMBL:EKF02982.1}; TaxID=1188 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
creatininase
sw_4_scaffold_224_19
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17646..18317
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI00030618D1
Uncharacterized protein {ECO:0000313|EMBL:ETX00498.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
sw_4_scaffold_224_20
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(18554..20080)
DNA (1527bp) protein (509aa)
DNA repair protein radA n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T8U1_9CYAN
DNA repair protein RadA
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_4_scaffold_224_21
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

20294..21022
DNA (729bp) protein (243aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YFJ4_HALP7
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AFZ45247.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halot
sw_4_scaffold_224_22
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

21215..21808
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WAP0_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ17298.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
sw_4_scaffold_224_23
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

21811..22347
DNA (537bp) protein (179aa)
Putative uncharacterized protein n=1 Tax=Moorea producens 3L RepID=F4XUP3_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EGJ31689.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
hypothetical protein
sw_4_scaffold_224_24
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(22359..22679)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI00034950A3
Tax=BJP_IG2069_Anaerolineales_43_63
sw_4_scaffold_224_25
Hirschia maritima, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22884..23162)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Hirschia maritima RepID=UPI000367789A
sw_4_scaffold_224_26
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(23588..25096)
DNA (1509bp) protein (503aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:
glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4W4J1_9CYAN
sw_4_scaffold_224_27
unknown

Not on your lists

comp(25459..25557)
DNA (99bp) protein (33aa)

This feature has no annotations

Displaying 28 items

View Taxonomy