ggKbase home page

sw_4_scaffold_43

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_43_1
unknown

Not on your lists

3..260
DNA (258bp) protein (86aa)

This feature has no annotations

sw_4_scaffold_43_2
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(283..1440)
DNA (1158bp) protein (386aa)
Arsenical-resistance protein n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T9H3_9CYAN
arsenical-resistance protein
Arsenical-resistance protein {ECO:0000313|EMBL:AFY79078.1}; Flags: Precursor;; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_4_scaffold_43_3
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1495..2466)
DNA (972bp) protein (324aa)
Bacterial extracellular solute-binding protein, putative n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VGZ9_9CYAN
Bacterial extracellular solute-binding protein, putative {ECO:0000313|EMBL:EDX78441.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source
phosphate ABC transporter substrate-binding protein
sw_4_scaffold_43_4
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

2565..3125
DNA (561bp) protein (187aa)
amidase (EC:3.5.1.87)
Amidase, hydantoinase/carbamoylase family {ECO:0000313|EMBL:AFY86473.1}; EC=3.5.1.87 {ECO:0000313|EMBL:AFY86473.1};; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;"
Amidase, hydantoinase/carbamoylase family n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TVQ3_9CYAN
sw_4_scaffold_43_5
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

3159..4088
DNA (930bp) protein (310aa)
TIGR01777 family protein n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T6B9_9CYAN
hypothetical protein
TIGR01777 family protein {ECO:0000313|EMBL:AFY78080.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_4_scaffold_43_6
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(4146..4970)
DNA (825bp) protein (275aa)
Uncharacterized iron-regulated protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9W966_9CYAN
iron-regulated protein
Uncharacterized iron-regulated protein {ECO:0000313|EMBL:AFZ16773.1}; Flags: Precursor;; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="
sw_4_scaffold_43_7
unknown

Not on your lists

5253..5483
DNA (231bp) protein (77aa)

This feature has no annotations

sw_4_scaffold_43_8
Limnoraphis robusta, Limnoraphis, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5499..7574)
DNA (2076bp) protein (692aa)
Universal stress family protein n=1 Tax=Lyngbya aestuarii BL J RepID=U7QL26_9CYAN
Sodium:proton antiporter {ECO:0000313|EMBL:KKD36582.1}; TaxID=1637645 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Limnoraphis.;" source="Limnoraphis robusta CS-951.;"
putative Na+/H+ antiporter
sw_4_scaffold_43_9
Rhodococcus sp. NS1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7630..8052
DNA (423bp) protein (141aa)
Uncharacterized protein {ECO:0000313|EMBL:AIU93913.1}; TaxID=402236 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. NS1.;"
sw_4_scaffold_43_10
Burkholderia phenoliruptrix, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8222..8977
DNA (756bp) protein (252aa)
Putative IS4 family transposase n=1 Tax=Burkholderia phenoliruptrix BR3459a RepID=K0DSA7_9BURK
IS4 family transposase
Putative IS4 family transposase {ECO:0000313|EMBL:AFT86249.1}; TaxID=1229205 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholde
sw_4_scaffold_43_11
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9078..9314)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UN50_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:EGK84559.1}; TaxID=756067 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus vaginatus FGP-2.;"
hypothetical protein
sw_4_scaffold_43_12
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

9692..11206
DNA (1515bp) protein (505aa)
Nitrite transporter subfamily n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VXZ0_9CYAN
Nitrite transporter subfamily {ECO:0000313|EMBL:EDX73231.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonopl
nitrite transporter
sw_4_scaffold_43_13
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

11985..13817
DNA (1833bp) protein (611aa)
assimilatory nitrite reductase (ferredoxin) precursor (EC:1.7.7.1)
Assimilatory nitrite reductase (Ferredoxin) {ECO:0000313|EMBL:AFY90754.1}; EC=1.7.7.1 {ECO:0000313|EMBL:AFY90754.1};; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;
Assimilatory nitrite reductase (Ferredoxin) n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U930_9CYAN
sw_4_scaffold_43_14
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

13964..15289
DNA (1326bp) protein (442aa)
HEAT repeat-containing protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9W799_9CYAN
HEAT repeat-containing protein
HEAT repeat-containing protein {ECO:0000313|EMBL:AFZ16073.1}; Flags: Precursor;; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcol
sw_4_scaffold_43_15
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15723..16010
DNA (288bp) protein (96aa)
Formate/nitrite transporter n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q0D3_9CLOT
formate/nitrite transporter
Formate/nitrite transporter {ECO:0000313|EMBL:EET85060.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.
sw_4_scaffold_43_16
unknown

Not on your lists

16174..16296
DNA (123bp) protein (41aa)

This feature has no annotations

sw_4_scaffold_43_17
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

16370..16816
DNA (447bp) protein (149aa)
cyanate lyase (EC:4.2.1.104)
Cyanate hydratase {ECO:0000256|HAMAP-Rule:MF_00535}; Short=Cyanase {ECO:0000256|HAMAP-Rule:MF_00535};; EC=4.2.1.104 {ECO:0000256|HAMAP-Rule:MF_00535};; Cyanate hydrolase {ECO:0000256|HAMAP-Rule:MF_005
Cyanate hydratase n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9Y7K1_HALP7
sw_4_scaffold_43_18
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

17290..18720
DNA (1431bp) protein (477aa)
ribulose 1,5-bisphosphate carboxylase large subunit (EC:4.1.1.39)
Ribulose bisphosphate carboxylase large chain {ECO:0000256|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit {ECO:0000256|HAMAP-Rule:MF_01338};; EC=4.1.1.39 {ECO:0000256|HAMAP-Rule:MF_01338};; TaxID=1
Ribulose bisphosphate carboxylase large chain n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XC36_9CHRO
sw_4_scaffold_43_19
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

18771..19181
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034A4B8C
chaperonin family protein RbcX
Chaperonin family protein RbcX {ECO:0000313|EMBL:AFZ14964.1}; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333
sw_4_scaffold_43_20
Richelia intracellularis, Richelia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

19423..19770
DNA (348bp) protein (116aa)
Ribulose bisphosphate carboxylase small chain {ECO:0000313|EMBL:CCH65664.1}; EC=4.1.1.39 {ECO:0000313|EMBL:CCH65664.1};; TaxID=1165095 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Richel
ribulose 1,5-bisphosphate carboxylase small subunit (EC:4.1.1.39)
Ribulose bisphosphate carboxylase small chain n=1 Tax=Richelia intracellularis HM01 RepID=M1WPC8_9NOST
sw_4_scaffold_43_21
Synechococcus sp. PCC 7502, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

20010..21350
DNA (1341bp) protein (447aa)
Ribulose bisphosphate carboxylase small subunit n=1 Tax=Synechococcus sp. PCC 7502 RepID=K9SRT2_9SYNE
ribulose bisphosphate carboxylase small subunit
Ribulose bisphosphate carboxylase small subunit {ECO:0000313|EMBL:AFY72666.1}; TaxID=1173263 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococ
sw_4_scaffold_43_22
Oscillatoriales cyanobacterium JSC-12, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

21424..22506
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GFS8_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:EKQ67410.1}; TaxID=864702 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales.;" source="Oscillatoriales cyanobacterium JSC-12.;"
hypothetical protein
sw_4_scaffold_43_23
unknown

Not on your lists

comp(22423..22620)
DNA (198bp) protein (66aa)

This feature has no annotations

sw_4_scaffold_43_24
Fischerella sp. JSC-11, Fischerella, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(22772..23350)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI00030A96CC
Putative uncharacterized protein {ECO:0000313|EMBL:EHC17905.1}; TaxID=741277 species="Bacteria; Cyanobacteria; Stigonematales; Fischerella.;" source="Fischerella sp. JSC-11.;"
hypothetical protein
sw_4_scaffold_43_25
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(23347..23997)
DNA (651bp) protein (217aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HPS0_CYAP4
Cobyrinic acid ac-diamide synthase
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:ACL45629.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC
sw_4_scaffold_43_26
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(24010..25143)
DNA (1134bp) protein (378aa)
CO2 hydration protein n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8G7Q7_9CYAN
Carbon dioxide transporter {ECO:0000313|EMBL:KJH73460.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
CO2 hydration protein
sw_4_scaffold_43_27
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(25091..26656)
DNA (1566bp) protein (522aa)
NAD(P)H-quinone oxidoreductase subunit D4 {ECO:0000313|EMBL:KJH73459.1}; EC=1.6.5.3 {ECO:0000313|EMBL:KJH73459.1};; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales
NAD(P)H-quinone oxidoreductase subunit D4 (EC:1.6.5.3)
Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8KSS5_9SYNC
sw_4_scaffold_43_28
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(26672..28507)
DNA (1836bp) protein (612aa)
NAD(P)H dehydrogenase, subunit NdhF3 family (EC:1.6.99.5)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000345F607
NAD(P)H-quinone oxidoreductase subunit F {ECO:0000313|EMBL:KJH73458.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CEN
sw_4_scaffold_43_29
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

29438..29740
DNA (303bp) protein (101aa)
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VY51_9CYAN
ethanolamine utilization protein EutN/carboxysome structural protein Ccml
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml {ECO:0000313|EMBL:AFZ12479.1}; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinali
sw_4_scaffold_43_30
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

29824..30486
DNA (663bp) protein (221aa)
carbonate dehydratase (EC:4.2.1.1)
carbon dioxide concentrating mechanism protein CcmM n=1 Tax=Mastigocladopsis repens RepID=UPI00031FCDA6
Cytochrome C biogenesis protein CcmM {ECO:0000313|EMBL:KIJ73365.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB51
Displaying items 1-30 of 44 in total

View Taxonomy