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sw_4_scaffold_48

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_48_1
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

210..1055
DNA (846bp) protein (282aa)
Transporter, CPA2 family {ECO:0000313|EMBL:EDX74847.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes
sodium/hydrogen exchanger
sw_4_scaffold_48_2
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1055..1504
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI00031BEB93
Transporter, CPA2 family {ECO:0000313|EMBL:EDX74847.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes
sodium/hydrogen exchanger
sw_4_scaffold_48_3
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1505..2092
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI00031BEB93
Transporter, CPA2 family {ECO:0000313|EMBL:EDX74847.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes
sw_4_scaffold_48_4
Lyngbya sp. PCC 8106, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(2258..4114)
DNA (1857bp) protein (619aa)
Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with Phytochrome (GAF) sensor n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YIU6_LYNSP
Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with Phytochrome (GAF) sensor {ECO:0000313|EMBL:EAW38947.1}; TaxID=313612 species="Bacteria; Cyanobacteria; Oscillatoriophycideae;
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
sw_4_scaffold_48_5
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4355..4705
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9Y966_HALP7
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ42628.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (strain
sw_4_scaffold_48_6
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(4743..6767)
DNA (2025bp) protein (675aa)
Precorrin-3 methyltransferase {ECO:0000313|EMBL:EGJ32083.1}; EC=2.1.1.131 {ECO:0000313|EMBL:EGJ32083.1};; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.
precorrin-3 methyltransferase (EC:2.1.1.131)
Precorrin-3 methyltransferase n=1 Tax=Moorea producens 3L RepID=F4XTE7_9CYAN
sw_4_scaffold_48_7
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(6871..7626)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9W7U0_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ16288.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
sw_4_scaffold_48_8
Limnoraphis robusta, Limnoraphis, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

7804..8805
DNA (1002bp) protein (334aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphat
Undecaprenyl-diphosphatase n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0U8N7_CYAP2
undecaprenol kinase
sw_4_scaffold_48_9
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8854..9354
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI000367DA16
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFN76998.1}; TaxID=1123519 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutz
sw_4_scaffold_48_10
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

9701..11062
DNA (1362bp) protein (454aa)
Polysaccharide biosynthesis protein n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XJF4_9CHRO
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:AFZ32186.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;
sw_4_scaffold_48_11
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11152..12948)
DNA (1797bp) protein (599aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" s
Pyruvate kinase n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YWX7_DACSA
pyruvate kinase
sw_4_scaffold_48_12
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(13079..14206)
DNA (1128bp) protein (376aa)
dihydroorotate oxidase A (EC:1.3.98.1)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:00
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WFQ8_9CYAN
sw_4_scaffold_48_13
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(14209..15453)
DNA (1245bp) protein (415aa)
UPF0272 protein Ple7327_2014 n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T4D1_9CYAN
hypothetical protein
UPF0272 protein Ple7327_2014 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_4_scaffold_48_14
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

15860..16399
DNA (540bp) protein (180aa)
Putative metal-dependent phosphoesterase, PHP family n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WKT9_9CYAN
metal-dependent phosphoesterase, PHP family
Putative metal-dependent phosphoesterase, PHP family {ECO:0000313|EMBL:AFZ20117.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Micro
sw_4_scaffold_48_15
unknown

Not on your lists

comp(16501..16614)
DNA (114bp) protein (38aa)

This feature has no annotations

sw_4_scaffold_48_16
unknown

Not on your lists

comp(16729..16845)
DNA (117bp) protein (39aa)

This feature has no annotations

sw_4_scaffold_48_17
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

17142..17819
DNA (678bp) protein (226aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XSZ2_STAC7
two component transcriptional regulator, winged helix family
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AFZ35648.1}; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (
sw_4_scaffold_48_18
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(17855..18550)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Spirulina subsalsa RepID=UPI00037D5031
LuxR family two component transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AFZ12214.1}; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinali
sw_4_scaffold_48_19
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(18832..19926)
DNA (1095bp) protein (365aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T1D8_9CYAN
sw_4_scaffold_48_20
Rubidibacter lacunae, Rubidibacter, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(20166..20411)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5D9Y1_9CHRO
Uncharacterized protein {ECO:0000313|EMBL:ERN41393.1}; TaxID=582515 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Rubidibacter.;" source="Rubidibacter lacunae KORDI 51-2.;"
ssl0242; hypothetical protein
sw_4_scaffold_48_21
Rubidibacter lacunae, Rubidibacter, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

20533..21201
DNA (669bp) protein (223aa)
PAP fibrillin n=1 Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5DKM8_9CHRO
PAP fibrillin {ECO:0000313|EMBL:ERN41472.1}; TaxID=582515 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Rubidibacter.;" source="Rubidibacter lacunae KORDI 51-2.;"
PAP fibrillin family protein
sw_4_scaffold_48_22
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

21264..22064
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9W9Z9_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ16347.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
sw_4_scaffold_48_23
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

22078..23292
DNA (1215bp) protein (405aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T649_9CYAN
molecular chaperone
sw_4_scaffold_48_24
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(23315..24193)
DNA (879bp) protein (293aa)
UspA domain-containing protein n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XXV3_STAC7
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:AFZ37430.1}; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437).
sw_4_scaffold_48_25
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(24593..24793)
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VRF8_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EDX75450.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthon
Phycobilisome degradation protein nblA
sw_4_scaffold_48_26
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

25381..25839
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Spirulina subsalsa RepID=UPI0002F921DF
RRM domain-containing RNA-binding protein
RRM domain-containing RNA-binding protein {ECO:0000313|EMBL:AFZ15999.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp.
sw_4_scaffold_48_27
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

26061..26771
DNA (711bp) protein (237aa)
ribose-5-phosphate isomerase (EC:5.3.1.6)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {E
Ribose-5-phosphate isomerase A n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9W906_9CYAN
sw_4_scaffold_48_28
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

26793..27287
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI000375BF42
Clp protease {ECO:0000313|EMBL:KIJ74012.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
ATPase
Displaying 28 items

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