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sw_4_scaffold_54

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_54_1
unknown

Not on your lists

1..150
DNA (150bp) protein (50aa)

This feature has no annotations

sw_4_scaffold_54_2
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

185..523
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CFE9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ42342.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
hypothetical protein
sw_4_scaffold_54_3
unknown

Not on your lists

740..1132
DNA (393bp) protein (131aa)

This feature has no annotations

sw_4_scaffold_54_4
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1167..1622
DNA (456bp) protein (152aa)
Genome sequencing data, contig C301 n=1 Tax=Microcystis aeruginosa PCC 9808 RepID=I4HKF1_MICAE
Genome sequencing data, contig C301 {ECO:0000313|EMBL:CCI22525.1}; TaxID=1160284 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa P
hypothetical protein
sw_4_scaffold_54_5
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1678..2745)
DNA (1068bp) protein (356aa)
UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000255|HAMAP-Rule:MF_00033}; EC=2.4.1.227 {ECO:0000255|HAMAP-Rule:MF_00033};;
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Cyanothece sp. (strain PCC 7424) RepID=MURG_CYAP7
sw_4_scaffold_54_6
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2944..3783
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WHI3_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ19234.1}; Flags: Precursor;; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp.
sw_4_scaffold_54_7
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

3911..4573
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PDR1_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY31106.1}; TaxID=99598 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
sw_4_scaffold_54_8
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4779..5525
DNA (747bp) protein (249aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279,
pyridoxine 5'-phosphate synthase (EC:2.6.99.2)
pyridoxine 5''''-phosphate synthase n=1 Tax=Mastigocladopsis repens RepID=UPI00030A5DB5
sw_4_scaffold_54_9
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

5613..5957
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YE38_HALP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ44737.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (strain
sw_4_scaffold_54_trna_1
unknown

Not on your lists

comp(6121..6205)
DNA (85bp)
transferRNA
sw_4_scaffold_54_10
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(6246..7178)
DNA (933bp) protein (311aa)
DNA repair exonuclease n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T257_9CYAN
DNA repair exonuclease
DNA repair exonuclease {ECO:0000313|EMBL:AFY76952.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_4_scaffold_54_11
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(7803..8228)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI0002DA0CC9
MFS transporter {ECO:0000313|EMBL:KIF22144.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
major facilitator superfamily protein
sw_4_scaffold_54_12
Cyanobacterium aponinum, Cyanobacterium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8433..8699)
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI0002DA0CC9
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AFZ54394.1}; TaxID=755178 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobacterium.;" source="Cyanobacterium aponinu
sw_4_scaffold_54_13
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

8806..9096
DNA (291bp) protein (97aa)
Transcriptional regulator n=1 Tax=Chamaesiphon minutus PCC 6605 RepID=K9UQS2_9CHRO
LysR family transcriptional regulator {ECO:0000313|EMBL:KIF13610.1}; TaxID=1574475 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montana BD
transcriptional regulator
sw_4_scaffold_54_14
Paenibacillus curdlanolyticus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9316..9771
DNA (456bp) protein (152aa)
Transcriptional regulator, LysR family n=1 Tax=Paenibacillus curdlanolyticus YK9 RepID=E0I5R5_9BACL
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EFM12307.1}; TaxID=717606 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus curdlano
transcriptional regulator
sw_4_scaffold_54_15
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

10066..11586
DNA (1521bp) protein (507aa)
GTP-binding protein HflX (EC:3.1.5.-)
GTPase HflX n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XZ81_STAC7
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria
sw_4_scaffold_54_16
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(11686..11991)
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000346FBAB
universal stress protein UspA-like protein
Universal stress protein UspA-like protein {ECO:0000313|EMBL:AFY75942.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_4_scaffold_54_17
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(12280..13671)
DNA (1392bp) protein (464aa)
Histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
histidinol dehydrogenase n=1 Tax=Spirulina subsalsa RepID=UPI0002D33BBE
sw_4_scaffold_54_18
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


13940..14236
DNA (297bp) protein (99aa)
30S ribosomal protein S20 n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YCS8_HALP7
30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (
sw_4_scaffold_54_19
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

14335..15162
DNA (828bp) protein (276aa)
Hydrolase, TatD family n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UG78_9CYAN
Hydrolase, TatD family {ECO:0000313|EMBL:EGK88106.1}; TaxID=756067 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus vaginatus FGP-2.;"
hydrolase, TatD family
sw_4_scaffold_54_20
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

15457..18774
DNA (3318bp) protein (1106aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0U748_CYAP2
DNA-directed RNA polymerase subunit beta
sw_4_scaffold_54_21
Rubidibacter lacunae, Rubidibacter, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

18968..20845
DNA (1878bp) protein (626aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=582515 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Rubidibac
DNA-directed RNA polymerase, gamma subunit n=1 Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5DJI6_9CHRO
DNA-directed RNA polymerase subunit gamma
sw_4_scaffold_54_22
Rubidibacter lacunae, Rubidibacter, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

20985..24989
DNA (4005bp) protein (1335aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01324}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01324};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01324};; RNA polymerase
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5DH14_9CHRO
sw_4_scaffold_54_23
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(25083..26321)
DNA (1239bp) protein (413aa)
Trypsin-like serine protease with C-terminal PDZ domain n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WLY3_9CYAN
trypsin-like serine protease with C-terminal PDZ domain
Trypsin-like serine protease with C-terminal PDZ domain {ECO:0000313|EMBL:AFZ21188.1}; Flags: Precursor;; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microc
sw_4_scaffold_54_24
unknown

Not on your lists

26508..26612
DNA (105bp) protein (35aa)

This feature has no annotations

sw_4_scaffold_54_25
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

26617..26988
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9Y7E8_HALP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ42360.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (strain
sw_4_scaffold_54_26
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(27457..27816)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI000372C90A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY76305.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_4_scaffold_54_27
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(28574..29260)
DNA (687bp) protein (229aa)
Glycosyltransferase, PMT family n=1 Tax=Moorea producens 3L RepID=F4XM47_9CYAN
Glycosyl transferase {ECO:0000313|EMBL:KIF17649.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
glycosyl transferase family 39
sw_4_scaffold_54_28
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(29200..30543)
DNA (1344bp) protein (448aa)
Glycosyl transferase family 39 n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XUK0_STAC7
glycosyl transferase family 39
Glycosyl transferase family 39 {ECO:0000313|EMBL:AFZ35739.1}; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437).
sw_4_scaffold_54_29
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(30506..31399)
DNA (894bp) protein (298aa)
Glycosyl transferase family 39 n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XUK0_STAC7
glycosyl transferase family 39
Glycosyl transferase family 39 {ECO:0000313|EMBL:AFZ35739.1}; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437).
Displaying items 1-30 of 54 in total

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