ggKbase home page

sw_4_scaffold_1909

Search features with annotation key words

Displaying 12 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_1909_1
RIFOXYC2_FULL_OD1_Falkowbacteria_36_12_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

3..575
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B543_TURPD
hypothetical protein Tax=RIFOXYC2_FULL_OD1_Falkowbacteria_36_12_curated
hypothetical protein
sw_4_scaffold_1909_trna_1
unknown

Not on your lists

914..998
DNA (85bp)
transferRNA
sw_4_scaffold_1909_2
unknown

Not on your lists

comp(1131..1616)
DNA (486bp) protein (162aa)

This feature has no annotations

sw_4_scaffold_1909_3

Not on your lists

1755..3050
DNA (1296bp) protein (432aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z3Q5_9BACT
Serine-tRNA ligase {ECO:0000313|EMBL:KKU53428.1}; TaxID=1618714 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWE2_47_10.;"
sw_4_scaffold_1909_4
Desulfurella acetivorans, Desulfurella, Desulfurellales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3321..3806
DNA (486bp) protein (162aa)
HIT family hydrolase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003639F46
diadenosine polyphosphate hydrolase
Diadenosine polyphosphate hydrolase {ECO:0000313|EMBL:AHF96649.1}; TaxID=694431 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfurellales; Desulfurellaceae; Desulfurella.;" source="Desul
sw_4_scaffold_1909_5
GWF2_OD1_39_8, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

3811..4230
DNA (420bp) protein (140aa)
NUDIX hydrolase {ECO:0000313|EMBL:KKR33559.1}; TaxID=1618642 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Falkowbacteria) bacterium GW2011_GWF2_39_8.;"
Putative uncharacterized protein id=4320128 bin=GWF2_CPR3_35_18 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=GWF2_CPR3_35_18 organism_group=CPR3
NUDIX hydrolase
sw_4_scaffold_1909_6
unknown

Not on your lists

5055..5555
DNA (501bp) protein (167aa)

This feature has no annotations

sw_4_scaffold_1909_7
GWA2_WS6_37_6, WS6, Bacteria

Not on your lists

comp(5626..6057)
DNA (432bp) protein (144aa)
molecular chaperone; K13993 HSP20 family protein id=5101997 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
Heat shock protein C4 {ECO:0000313|EMBL:KKQ35400.1}; TaxID=1619087 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWA2_37_6.;"
heat shock protein hsp20
sw_4_scaffold_1909_8
R_RIF_OD1_09_47_33b, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(6131..6727)
DNA (597bp) protein (199aa)
Haloacid dehalogenase superfamily enzyme, subfamily IA n=1 Tax=mine drainage metagenome RepID=T1CCC6_9ZZZZ
Haloacid dehalogenase superfamily enzyme, subfamily IA Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_47_33b_curated
sw_4_scaffold_1909_9
R_RIF_OD1_05_43_12, RIF-OD1-5, Parcubacteria, Bacteria

Not on your lists

6808..7278
DNA (471bp) protein (157aa)
RNA-metabolising metallo-beta-lactamase n=1 Tax=Clostridium ultunense Esp RepID=M1ZDS8_9CLOT
putative exonuclease of the beta-lactamase fold involved in RNA processing; K07576 metallo-beta-lactamase family protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_05_43_12_curated
RNA-metabolising metallo-beta-lactamase
sw_4_scaffold_1909_10
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

7232..8083
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000361F12D
RNA-metabolising metallo-beta-lactamase; K07576 metallo-beta-lactamase family protein Tax=GWB1_OD1_49_6_curated
beta-lactamase
sw_4_scaffold_1909_11
Methanotorris igneus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

8094..10157
DNA (2064bp) protein (688aa)
Acetyl coenzyme A synthetase (ADP forming), alpha domain protein n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BDD3_METIK
acetyl coenzyme A synthetase alpha domain-containing protein
Acetyl coenzyme A synthetase (ADP forming), alpha domain protein {ECO:0000313|EMBL:AEF96494.1}; TaxID=880724 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Meth
Displaying 12 items

View Taxonomy