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sw_4_scaffold_398

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_398_1
R_OD1_Falkowbacteria_47_11b, Falkowbacteria, Parcubacteria, Bacteria

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2..520
DNA (519bp) protein (173aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FX6_METBF
dTDP-4-dehydrorhamnose reductase Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_47_11b_curated
sw_4_scaffold_398_2
Nannochloropsis gaditana, Nannochloropsis, Eustigmatales, Eustigmatophyceae, Eukaryota

Not on your lists

533..1003
DNA (471bp) protein (157aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|RuleBase:RU003795}; EC=2.5.1.78 {ECO:0000256|RuleBase:RU003795};; TaxID=72520 species="Eukaryota; Stramenopiles; Eustigmatophyceae; Eustigmatales;
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Saprolegnia diclina VS20 RepID=T0Q3I2_9STRA
6,7-dimethyl-8-ribityllumazine synthase
sw_4_scaffold_398_3
RBG_13_RIF_OD1_07_36_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(1324..1527)
DNA (204bp) protein (68aa)
hypothetical protein Tax=RBG_13_RIF_OD1_07_36_15_curated
sw_4_scaffold_398_4
R_OD1_Wolfebacteria_41_13b, Wolfebacteria, Parcubacteria, Bacteria

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1615..2250
DNA (636bp) protein (212aa)
transmembrane protein Tax=RIFCSPLOWO2_02_FULL_OD1_Wolfebacteria_41_13b_curated
Peptidase M50 id=1797410 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
peptidase M50
sw_4_scaffold_398_5
R_OD1_Falkowbacteria_46_11b, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

2503..3255
DNA (753bp) protein (251aa)
Putative membrane protein n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5Y5U5_9FIRM
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_OD1_Falkowbacteria_46_11b_curated
hypothetical protein
sw_4_scaffold_398_6

Not on your lists

3258..4322
DNA (1065bp) protein (355aa)
Putative uncharacterized protein n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TBS6_HELMI
Uncharacterized protein {ECO:0000313|EMBL:KKQ57140.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
hypothetical protein
sw_4_scaffold_398_7
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

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4319..4915
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DF56_BRAJP
GDYXXLXY domain-containing protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein
sw_4_scaffold_398_8
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5435..5875
DNA (441bp) protein (147aa)
50S ribosomal protein L9 n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002D999E4
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1
rplI; 50S ribosomal protein L9
sw_4_scaffold_398_9
R_OD1_Uhrbacteria_60_10, Uhrbacteria, Parcubacteria, Bacteria

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5856..7526
DNA (1671bp) protein (557aa)
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=RIFCSPHIGHO2_02_FULL_OD1_Uhrbacteria_60_10_curated
CTP synthase (EC:6.3.4.2)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000380A0F3
sw_4_scaffold_398_10
GWC1_CPR2_41_48, CPR2, Bacteria

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comp(7544..8395)
DNA (852bp) protein (284aa)
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD id=2899208 bin=GWC2_CPR2_39_35 species=unknown genus=Nitratiruptor taxon_order=unknown taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWC2_CPR2_39_35 organism_group=CPR2 organism_desc=Candidate for curation
Bifunctional protein FolD {ECO:0000313|EMBL:KKS08902.1}; TaxID=1618344 species="Bacteria; candidate division CPR2.;" source="candidate division CPR2 bacterium GW2011_GWC1_41_48.;"
sw_4_scaffold_398_11
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8406..9623)
DNA (1218bp) protein (406aa)
glycine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase id=3423990 bin=GWC2_Planctomycetes_45_44 species=Thermobispora bispora genus=Thermobispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
Tax=BJP_IG2069_Desfulfarculales_53_13
sw_4_scaffold_398_12
unknown

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9754..10434
DNA (681bp) protein (227aa)

This feature has no annotations

Displaying 12 items

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