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sw_4_scaffold_439

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_439_trna_3
unknown

Not on your lists

comp(16..100)
DNA (85bp)
transferRNA
sw_4_scaffold_439_trna_2
unknown

Not on your lists

comp(117..188)
DNA (72bp)
transferRNA
sw_4_scaffold_439_1
Capitella teleta, Capitella, Capitellida, Scolecida, Annelida, Metazoa

Not on your lists

comp(239..1303)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Capitella teleta RepID=R7UY45_CAPTE
Uncharacterized protein {ECO:0000313|EMBL:ELU11167.1, ECO:0000313|EnsemblMetazoa:CapteP202309}; TaxID=283909 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Polychaeta; Scolecida; Capitellida;
Zinc finger-domain-containing protein
sw_4_scaffold_439_2
GWF2_CPR3_35_18, CPR3, Bacteria

Not on your lists

comp(1327..1782)
DNA (456bp) protein (152aa)
Elongation factor Ts id=4209203 bin=GWF2_CPR3_35_18 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=GWF2_CPR3_35_18 organism_group=CPR3
Elongation factor Ts Tax=GWF2_CPR3_35_18
tsf; translation elongation factor Ts
sw_4_scaffold_439_3
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists


comp(1810..2505)
DNA (696bp) protein (232aa)
30S ribosomal protein S2 n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003611E1D
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=CG_CPR10_03
30S ribosomal protein S2
sw_4_scaffold_439_4
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

comp(2565..3707)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FIT6_9BACT
spoVE; stage V sporulation protein E Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
stage V sporulation protein E
sw_4_scaffold_439_5
GWE2_OD1_46_68, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3704..5119)
DNA (1416bp) protein (472aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase id=1827947 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
UDP-N-acetylmuramoylalanine-D-glutamate ligase {ECO:0000313|EMBL:KKU41846.1}; TaxID=1618994 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWE2_46_68.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase
sw_4_scaffold_439_6
GWE1_OD1-i_ACD11_lin_49_15, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5123..6688)
DNA (1566bp) protein (522aa)
aar:Acear_0086 N-acyl-D-amino-acid deacylase (EC:3.5.1.81); K06015 [EC:3.5.1.81] id=138618 bin=ACD9 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=ACD9 organism_group=OD1-i organism_desc=OD1-i
N-acyl-D-amino-acid deacylase (EC:3.5.1.81)
N-acyl-D-amino-acid deacylase {ECO:0000313|EMBL:KKW06273.1}; TaxID=1618710 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWE1_49_15.;"
sw_4_scaffold_439_7
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(6759..7808)
DNA (1050bp) protein (350aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide transferase (EC:2.7.8.13) Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Phospho-N-acetylmuramoyl-pentapeptide-transferase id=1273243 bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
hypothetical protein
sw_4_scaffold_439_8
RBG_16_OP11_44_10_curated, Microgenomates, Bacteria

Not on your lists

8765..9466
DNA (702bp) protein (234aa)
uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] Tax=RBG_16_OP11_44_10_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EKH8_9BACT
hypothetical protein
sw_4_scaffold_439_9

Not on your lists

comp(10553..11314)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BA51_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD59009.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
sw_4_scaffold_439_10
GWC1_CPR2_41_48, CPR2, Bacteria

Not on your lists

comp(15238..16494)
DNA (1257bp) protein (419aa)
Trigger factor id=2345679 bin=GWD1_TM7_39_7 species=Ruminococcus sp. SR1/5 genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
Trigger factor {ECO:0000313|EMBL:KKS08820.1}; TaxID=1618344 species="Bacteria; candidate division CPR2.;" source="candidate division CPR2 bacterium GW2011_GWC1_41_48.;"
trigger factor
sw_4_scaffold_439_trna_1
unknown

Not on your lists

comp(16780..16852)
DNA (73bp)
transferRNA
sw_4_scaffold_439_11
unknown

Not on your lists

16943..17107
DNA (165bp) protein (55aa)

This feature has no annotations

sw_4_scaffold_439_12

Not on your lists

comp(17261..18049)
DNA (789bp) protein (263aa)
Transcriptional regulator, TrmB {ECO:0000313|EMBL:KKT29746.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
Transcriptional regulator, TrmB id=1955928 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
iclR helix-turn-helix domain protein
sw_4_scaffold_439_13
RLO_PER_ii_53_10, PER-ii, Bacteria

Not on your lists

comp(18095..18931)
DNA (837bp) protein (279aa)
comEC; competence protein ComEC; K02238 competence protein ComEC Tax=RIFCSPLOWO2_12_FULL_PER_ii_53_10_curated
DNA internalization-related competence protein ComEC/Rec2 id=3423416 bin=GWA1_ZB2_49_26 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
ComEC family competence protein
sw_4_scaffold_439_14

Not on your lists

comp(18928..20346)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F1J3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE11864.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ComEC/Rec2-like protein
Displaying 17 items

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