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sw_4_scaffold_522

Search features with annotation key words

Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_522_1
unknown

Not on your lists

comp(2..109)
DNA (108bp) protein (36aa)

This feature has no annotations

sw_4_scaffold_522_2
R_OP11_Pacebacteria_46_9, Pacebacteria, Microgenomates, Bacteria

Not on your lists

comp(106..1500)
DNA (1395bp) protein (465aa)
id=5087642 Tax=RIFCSPHIGHO2_02_FULL_OP11_Pacebacteria_46_9_curated
transmembrane_regions 38..57 id=120102 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
sw_4_scaffold_522_3
unknown

Not on your lists

2464..2745
DNA (282bp) protein (94aa)

This feature has no annotations

sw_4_scaffold_522_4
unknown

Not on your lists

comp(2751..3329)
DNA (579bp) protein (193aa)

This feature has no annotations

sw_4_scaffold_522_5
R_SM2F11_49_9, SM2F11, Bacteria

Not on your lists


comp(3342..5069)
DNA (1728bp) protein (576aa)
alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RIFCSPHIGHO2_01_FULL_SM2F11_49_9_curated
alanyl-tRNA synthetase (EC:6.1.1.7) id=15190515 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
alanyl-tRNA ligase (EC:6.1.1.7)
sw_4_scaffold_522_trna_1
unknown

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5378..5450
DNA (73bp)
transferRNA
sw_4_scaffold_522_6
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5521..6099
DNA (579bp) protein (193aa)
3-methyladenine DNA glycosylase (EC:3.2.2.21); K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21] Tax=CG_Solirubrobact_01
Putative 3-methyladenine DNA glycosylase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJL8_9FIRM
DNA-3-methyladenine glycosylase
sw_4_scaffold_522_7
RBG_13_RIF_OD1_08_40_8_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(6106..6450)
DNA (345bp) protein (115aa)
hypothetical protein Tax=RBG_13_RIF_OD1_08_40_8_curated
hypothetical protein id=5102126 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
MazG nucleotide pyrophosphohydrolase
sw_4_scaffold_522_8
unknown

Not on your lists

comp(6621..7349)
DNA (729bp) protein (243aa)

This feature has no annotations

sw_4_scaffold_522_9
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(7632..8459)
DNA (828bp) protein (276aa)
bacA; hypothetical protein; K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] Tax=GWC1_OD1_45_14
uppP; undecaprenyl-diphosphatase UppP (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LGR3_THEPS
sw_4_scaffold_522_10
unknown

Not on your lists

comp(8465..8935)
DNA (471bp) protein (157aa)

This feature has no annotations

sw_4_scaffold_522_11
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(8938..9636)
DNA (699bp) protein (233aa)
putative ribonuclease III (EC:3.1.26.3) Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
RNAse III (EC:3.1.26.3)
Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NB11_EUBSP id=16632 bin=ACD1 species=Clostridium scindens genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
sw_4_scaffold_522_12

Not on your lists

comp(9641..10072)
DNA (432bp) protein (144aa)
N utilization substance protein B-like protein {ECO:0000313|EMBL:KKP43139.1}; TaxID=1618807 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_33_14.;"
N utilization substance protein B homolog id=4790030 bin=GWC2_OD1_43_27 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
putative transcription termination factor
sw_4_scaffold_522_13
Brevibacillus sp. BC25, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10335..10553)
DNA (219bp) protein (73aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Brevibacillus sp. BC25 RepID=J2H733_9BACL
Displaying 14 items

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