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sw_4_scaffold_570

Search features with annotation key words

Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_570_1
unknown

Not on your lists

comp(1..444)
DNA (444bp) protein (148aa)

This feature has no annotations

sw_4_scaffold_570_2
unknown

Not on your lists

comp(410..1219)
DNA (810bp) protein (270aa)

This feature has no annotations

sw_4_scaffold_570_3
R_OD1_Kaiserbacteria_49_11, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists


1782..2072
DNA (291bp) protein (97aa)
30S ribosomal protein S16 (EC:3.1.4.-); K02959 small subunit ribosomal protein S16 Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_49_11_curated
rpsP; 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 id=86892 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
rpsP; 30S ribosomal protein S16
sw_4_scaffold_570_4
CG_CPR05_01, CG_CPR05, Bacteria

Not on your lists

2262..4001
DNA (1740bp) protein (580aa)
rnjA; ribonuclease J 1 (EC:3.1.-.-) Tax=CG_CPR05_01
RNA-metabolising metallo-beta-lactamase id=3013277 bin=GWC1_OD1_38_17 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RNA-metabolising metallo-beta-lactamase
sw_4_scaffold_570_5
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

4026..5804
DNA (1779bp) protein (593aa)
RNA-metabolising metallo-beta-lactamase; K12574 ribonuclease J [EC:3.1.-.-] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
bts:Btus_1570 RNA-metabolising metallo-beta-lactamase; K12574 ribonuclease J [EC:3.1.-.-] id=53980 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
rnjA; ribonuclease J 1 (EC:3.1.-.-)
sw_4_scaffold_570_6
Actinotignum schaalii, Actinotignum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5812..6546
DNA (735bp) protein (245aa)
DNA repair protein RecO n=1 Tax=Actinobaculum schaalii FB123-CNA-2 RepID=S2VGS0_9ACTO
DNA recombination protein RecO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=59505 species="Bacteria; Actinobacteria; Acti
sw_4_scaffold_570_7

Not on your lists

6578..7360
DNA (783bp) protein (261aa)
transmembrane_regions 60..82 id=3335 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:EKE16469.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
sw_4_scaffold_570_8
GWF2_OD1_36_839, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

7399..8349
DNA (951bp) protein (317aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ17547.1}; TaxID=1618723 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF2_36_839.;"
id=2824162 bin=GWC1_OD1_38_17 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
sw_4_scaffold_570_9
GWF2_OD1_35_54, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(8440..10023)
DNA (1584bp) protein (528aa)
gpmI; phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=uncultured bacterium RepID=K2FUP4_9BACT
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000313|EMBL:KKP82758.1}; TaxID=1618722 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF2
sw_4_scaffold_570_10
Heterocephalus glaber, Heterocephalus, Rodentia, Mammalia, Chordata, Metazoa

Not on your lists

10138..10938
DNA (801bp) protein (267aa)
Dentin sialophosphoprotein (Fragment) n=2 Tax=Heterocephalus glaber RepID=G5BSU6_HETGA
Dentin sialophosphoprotein {ECO:0000313|EMBL:EHB12357.1}; Flags: Fragment;; TaxID=10181 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires;
uncharacterized LOC100481808
sw_4_scaffold_570_trna_1
unknown

Not on your lists

11034..11106
DNA (73bp)
transferRNA
sw_4_scaffold_570_11
Parcubacteria bacterium GW2011_GWB1_50_9, Parcubacteria, Bacteria

Not on your lists

11237..11818
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Legionella tunisiensis RepID=UPI000367B5BB
Isochorismatase hydrolase family protein {ECO:0000313|EMBL:KKW18087.1}; TaxID=1618884 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_50_9.;"
Isochorismatase
sw_4_scaffold_570_12
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12128..12400
DNA (273bp) protein (91aa)
Acylphosphatase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JQL8_9BACT
Acylphosphatase {ECO:0000313|EMBL:ELR71236.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
acylphosphatase
sw_4_scaffold_570_13
R_SM2F11_50_11, SM2F11, Bacteria

Not on your lists

12447..13511
DNA (1065bp) protein (355aa)
dihydrouridine synthase dus Tax=RIFCSPHIGHO2_01_FULL_SM2F11_50_11_curated
dihydrouridine synthase dus id=15188371 bin=GWF2_WS6 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=GWF2_WS6 organism_group=WS6 (Doikabacteria) organism_desc=Complete genome
dihydrouridine synthase dus
sw_4_scaffold_570_trna_2
unknown

Not on your lists

12450..12522
DNA (73bp)
transferRNA
sw_4_scaffold_570_14
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13477..13875)
DNA (399bp) protein (133aa)
Large-conductance mechanosensitive channel n=1 Tax=Azoarcus sp. (strain BH72) RepID=MSCL_AZOSB
mscL; large-conductance mechanosensitive channel
Large-conductance mechanosensitive channel {ECO:0000255|HAMAP-Rule:MF_00115}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoa
sw_4_scaffold_570_15
R_Gammaproteobacteria_45_9, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13887..14189)
DNA (303bp) protein (101aa)
Ferredoxin, 2Fe-2s n=1 Tax=uncultured bacterium RepID=K2BH76_9BACT
ferredoxin, 2Fe-2s Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_45_9_curated
ferredoxin, 2Fe-2s
sw_4_scaffold_570_16
unknown

Not on your lists

comp(14533..14868)
DNA (336bp) protein (112aa)

This feature has no annotations

sw_4_scaffold_570_17
CG_CPR02_01, CG_CPR02, Bacteria

Not on your lists

14974..16002
DNA (1029bp) protein (343aa)
Tax=CG_CPR02_01
sw_4_scaffold_570_18
Sulfurospirillum deleyianum, Sulfurospirillum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

16049..17563
DNA (1515bp) protein (505aa)
leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase n=1 Tax=Sulfurospirillum deleyianum (strain ATCC 51133 / DSM 6946 / 5175) RepID=D1B198_SULD5
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=525898 speci
sw_4_scaffold_570_19

Not on your lists

17578..18189
DNA (612bp) protein (204aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM85815.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein id=12864 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
hypothetical protein
sw_4_scaffold_570_20
R_PER_ii_51_35, PER-ii, Bacteria

Not on your lists

18189..19442
DNA (1254bp) protein (418aa)
L-sorbosone dehydrogenase Tax=RIFCSPHIGHO2_01_FULL_PER_ii_51_35_curated
L-sorbosone dehydrogenase id=5101946 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
glucose/sorbosone dehydrogenase-like protein
sw_4_scaffold_570_21
R_OD1_Uhrbacteria_48_12, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

19486..19659
DNA (174bp) protein (58aa)
NAD(P)H dehydrogenase (Quinone) n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C1K6_DELAS
NAD(P)H dehydrogenase (quinone) Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_48_12_curated
NAD(P)H dehydrogenase (quinone)
Displaying 23 items

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